Evidence map›Paper›PMID 28673969›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

BAK α6 permits activation by BH3-only proteins and homooligomerization via the canonical hydrophobic groove.

Mark Xiang Li, Iris K L Tan, Stephen B Ma, Colin Hockings, Tobias Kratina, Michael A Dengler, Amber E Alsop, Ruth M Kluck, Grant Dewson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

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  12. VDAC2 and the BCL-2 family of proteins.Biochemical Society transactions · 2021
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. BAX, BAK, and BOK: A Coming of Age for the BCL-2 Family Effector Proteins.Cold Spring Harbor perspectives in biology · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Mark Xiang LiWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Iris K L TanWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Stephen B MaWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Colin HockingsWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Tobias KratinaWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Michael A DenglerWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Amber E AlsopWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Ruth M KluckWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia.
Grant DewsonWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC 3052, Australia; dewson@wehi.edu.au.
Walter and Eliza Hall Institute of Medical Research · AUUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BAK and BAX are the essential effectors of apoptosis because without them a cell is resistant to most apoptotic stimuli. BAK and BAX undergo conformation changes to homooligomerize then permeabilize the mitochondrial outer membrane during apoptosis. How BCL-2 homology 3 (BH3)-only proteins bind to activate BAK and BAX is unclear. We report that BH3-only proteins bind inactive full-length BAK at mitochondria and then dissociate following exposure of the BAK BH3 and BH4 domains before BAK homodimerization. Using a functional obstructive labeling approach, we show that activation of BAK involves important interactions of BH3-only proteins with both the canonical hydrophobic binding groove (α2-5) and α6 at the rear of BAK, with interaction at α6 promoting an open groove to receive a BH3-only protein. Once activated, how BAK homodimers multimerize to form the putative apoptotic pore is unknown. Obstructive labeling of BAK beyond the BH3 domain and hydrophobic groove did not inhibit multimerization and mitochondrial damage, indicating that critical protein-protein interfaces in BAK self-association are limited to the α2-5 homodimerization domain.

Indexed as

AnimalsApoptosisbcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinBH3 Interacting Domain Death Agonist ProteinBinding SitesCell LineCytochromes cDisulfidesEpitopesFibroblastsHydrophobic and Hydrophilic InteractionsMiceMice, Inbred C57BLMitochondriaMitochondrial MembranesBak1 protein, mouseBax protein, mousebcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinBH3 Interacting Domain Death Agonist ProteinCytochromes cDisulfidesEpitopesapoptosisBAKBAXBH3-only proteinmitochondria

Identifiers

PMID28673969
PMCPMC5530671
OpenAlexW2732876755

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.