Evidence map›Paper›PMID 28673962›Full record

ArticleThe Biochemical journal2017

Potential mechanisms linking SIRT activity and hypoxic 2-hydroxyglutarate generation: no role for direct enzyme (de)acetylation.

Sergiy M Nadtochiy, Yves T Wang, Jimmy Zhang, Keith Nehrke, Xenia Schafer, Kevin Welle, Sina Ghaemmaghami, Josh Munger, Paul S Brookes

Abstract read
In one paragraph

Article in The Biochemical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sergiy M NadtochiyDepartment of Anesthesiology, University of Rochester Medical Center, Rochester, NY 14642, U.S.A.
Yves T WangDepartment of Anesthesiology, University of Rochester Medical Center, Rochester, NY 14642, U.S.A.
Jimmy ZhangDepartment of Pharmacology and Physiology, University of Rochester Medical Center, Rochester, NY, U.S.A.
Keith NehrkeDepartment of Medicine, University of Rochester Medical Center, Rochester, NY, U.S.A.
Xenia SchaferDepartment of Biochemistry, University of Rochester Medical Center, Rochester, NY, U.S.A.
Kevin WelleDepartment of Proteomics Core Facility, University of Rochester Medical Center, Rochester, NY, U.S.A.
Sina GhaemmaghamiDepartment of Biology, University of Rochester Medical Center, Rochester, NY, U.S.A.
Josh MungerDepartment of Biochemistry, University of Rochester Medical Center, Rochester, NY, U.S.A.
Paul S BrookesDepartment of Anesthesiology, University of Rochester Medical Center, Rochester, NY 14642, U.S.A. paul_brookes@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

SIRT1, Nitro-Lipids and CardioprotectionR01HL071158 · NHLBI · UNIVERSITY OF ROCHESTER · PI BROOKES, PAUL S · 2003 to 2025
$7.7M
The Role of the Mitochondrial UPR in Ischemic ProtectionR01HL127891 · NHLBI · UNIVERSITY OF ROCHESTER · PI BROOKES, PAUL S, NEHRKE, KEITH · 2015 to 2018
$2.5M
HCMV-mediated repurposing of AMPK & CaMKK signaling for productive infectionR01AI127370 · NIAID · UNIVERSITY OF ROCHESTER · PI MUNGER, JOSHUA C · 2016 to 2020
$1.9M
QExactive for UR Proteomics ResearchS10OD021486 · OD · UNIVERSITY OF ROCHESTER · PI GHAEMMAGHAMI, SINA · 2016 to 2016
$309k
NHLBI NIH HHS R01 HL071158NHLBI NIH HHS R01 HL127891NIAID NIH HHS R01 AI127370NIH HHS S10 OD021486
6 · The paper itself

Abstract

2-Hydroxyglutarate (2-HG) is a hypoxic metabolite with potentially important epigenetic signaling roles. The mechanisms underlying 2-HG generation are poorly understood, but evidence suggests a potential regulatory role for the sirtuin family of lysine deacetylases. Thus, we hypothesized that the acetylation status of the major 2-HG-generating enzymes [lactate dehydrogenase (LDH), isocitrate dehydrogenase (IDH) and malate dehydrogenase (MDH)] may govern their 2-HG-generating activity.

Indexed as

Protein Processing, Post-TranslationalAcetylationAnimalsCell HypoxiaEnzyme AssaysGlutaratesHEK293 CellsHumansIsocitrate DehydrogenaseKineticsL-Lactate DehydrogenaseLysineMalate DehydrogenaseMaleMiceMice, Knockoutalpha-hydroxyglutarateGlutaratesIsocitrate DehydrogenaseL-Lactate DehydrogenaseLysineMalate DehydrogenaseMitochondrial ProteinsSirt3 protein, mouseSirtuin 3acetylationepigeneticshypoxiaischemiasirtuins

Identifiers

PMID28673962
PMCPMC5562404
OpenAlexW2949744279

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.