Evidence map›Paper›PMID 28672275›Full record

ArticleJournal of clinical virology : the official publication of the Pan American Society for Clinical Virology2017

Genetic divergence of Influenza A(H3N2) amino acid substitutions mark the beginning of the 2016-2017 winter season in Israel.

Aharona Glatman-Freedman, Yaron Drori, Sharon Alexandra Beni, Nehemya Friedman, Rakefet Pando, Hanna Sefty, Ilana Tal, John McCauley, Galia Rahav, Nathan Keller and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  8. Safety, immunogenicity and protection of A(H3N2) live attenuated influenza vaccines containing wild-type nucleoprotein in a ferret model.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2018
    Article
  9. Influenza A(H3N2) virus variants and patient characteristics during a summer influenza epidemic in Taiwan, 2017.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2017
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Aharona Glatman-FreedmanThe Israel Center for Disease Control, Israel Ministry of Health, Tel-Hashomer, Ramat Gan, Israel; Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Departments of Pediatrics and Family and Community Medicine, New York Medical College, Valhalla, New York, USA.
Yaron DroriDepartment of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Sharon Alexandra BeniDivision of Infectious Diseases, Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Nehemya FriedmanDepartment of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Rakefet PandoThe Israel Center for Disease Control, Israel Ministry of Health, Tel-Hashomer, Ramat Gan, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Hanna SeftyThe Israel Center for Disease Control, Israel Ministry of Health, Tel-Hashomer, Ramat Gan, Israel.
Ilana TalDivision of Infectious Diseases, Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
John McCauleyWHO Collaborating Centre for Reference and Research on Influenza, Crick Worldwide Influenza Centre, the Francis Crick Institute, London, United Kingdom.
Galia RahavDivision of Infectious Diseases, Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel; Department of Internal Medicine, Sackler Faculty of Medicine, Tel-Aviv University, Israel.
Nathan KellerMicrobiology Laboratory, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel; Ariel University, Ariel, Israel.
Tamy ShohatThe Israel Center for Disease Control, Israel Ministry of Health, Tel-Hashomer, Ramat Gan, Israel; Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Ella MendelsonDepartment of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Musa HindiyehDepartment of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel.
Michal MandelboimDepartment of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel; Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer, Ramat Gan, Israel. Electronic address: michalman@sheba.health.gov.il.
Sheba Medical Center · ILTel Aviv University · ILIsrael Ministry of Health · ILAriel University · ILThe Francis Crick Institute · GB

Funding

Cancer Research UKMedical Research Council MC_U117512723Wellcome Trust FC001030
6 · The paper itself

Abstract

backgroundInfluenza vaccine composition is reevaluated each year due to the frequency and accumulation of genetic changes that influenza viruses undergo. The beginning of the 2016-2017 influenza surveillance period in Israel has been marked by the dominance of influenza A(H3N2).

objectivesTo evaluate the type, subtype, genetic evolution and amino acid substitutions of influenza A(H3N2) viruses detected among community patients with influenza-like illness (ILI) and hospitalized patients with respiratory illness in the first weeks of the 2016-2017 influenza season. STUDY

designRespiratory samples from community patients with influenza-like illness and from hospitalized patients underwent identification, subtyping and molecular characterization. Hemagglutinin sequences were compared to the vaccine strain, phylogenetic tree was created, and amino acid substitutions were determined.

resultsInfluenza A(H3N2) predominated during the early stages of the 2016-2017 influenza season. Noticeably, approximately 20% of community patients and 36% of hospitalized patients, positive for influenza

conclusionsCharacterization of the 2016-2017 A(H3N2) influenza viruses is imperative for determining the future influenza vaccine composition.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsDogsGenetic DriftHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H3N2 SubtypeInfluenza, HumanIsraelMadin Darby Canine Kidney CellsModels, MolecularMolecular Diagnostic TechniquesMolecular EpidemiologyPhylogenySeasonsHemagglutinin Glycoproteins, Influenza VirusClade 3C.2a1H(3)N(2)Influenza AInfluenza vaccine

Identifiers

PMID28672275
PMCPMC5711789
OpenAlexW2621215574

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.