Evidence map›Paper›PMID 28671352›Full record

ArticleJournal of orthopaedic research : official publication of the Orthopaedic Research Society2018

Transcriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis.

Jakob T Sieker, Benedikt L Proffen, Kimberly A Waller, Kaitlyn E Chin, Naga Padmini Karamchedu, Matthew R Akelman, Gabriel S Perrone, Ata M Kiapour, Johannes Konrad, Martha M Murray and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of orthopaedic research : official publication of the Orthopaedic Research Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 43 citations in OpenAlex.

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  9. Epigenetic dysregulation of articular cartilage during progression of hip femoroacetabular impingement disease.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jakob T SiekerBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-8970-540X
Benedikt L ProffenBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Kimberly A WallerRhode Island Hospital, Warren Alpert Medical School of Brown University, Providence, Rhode Island.
Kaitlyn E ChinRhode Island Hospital, Warren Alpert Medical School of Brown University, Providence, Rhode Island.
Naga Padmini KaramcheduRhode Island Hospital, Warren Alpert Medical School of Brown University, Providence, Rhode Island.
Matthew R AkelmanRhode Island Hospital, Warren Alpert Medical School of Brown University, Providence, Rhode Island.
Gabriel S PerroneBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Ata M KiapourBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-7742-5769
Johannes KonradBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Martha M MurrayBoston Children's Hospital, Harvard Medical School, Boston, Massachusetts.
Braden C FlemingRhode Island Hospital, Warren Alpert Medical School of Brown University, Providence, Rhode Island.
Boston Children's Hospital · USBrown University · US

Funding

SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
Biologically Enhanced Healing of Autograft ACL Reconstruction.R01AR056834 · NIAMS · RHODE ISLAND HOSPITAL · PI FLEMING, BRADEN C, MURRAY, MARTHA M · 2009 to 2017
$5.8M
Non-invasive Assessment of Ligament Healing, in VivoR01AR065462 · NIAMS · RHODE ISLAND HOSPITAL · PI FLEMING, BRADEN C, MURRAY, MARTHA M · 2014 to 2016
$2.1M
NIAMS NIH HHS R01 AR056834NIAMS NIH HHS R01 AR065462NICHD NIH HHS P30 HD018655
6 · The paper itself

Abstract

To identify the molecular pathophysiology present in early post-traumatic osteoarthritis (PTOA), the transcriptional profile of articular cartilage and its response to surgical PTOA induction were determined. Thirty six Yucatan minipigs underwent anterior cruciate ligament (ACL) transection and were randomly assigned in equal numbers to no further treatment, reconstruction or ligament repair. Cartilage was harvested at 1 and 4 weeks post-operatively and histology and RNA-sequencing were performed and compared to controls. Microscopic cartilage scores significantly worsened at 1 (p = 0.028) and 4 weeks (p = 0.001) post-surgery relative to controls, but did not differ between untreated, reconstruction or repair groups. Gene expression after ACL reconstruction and ACL transection were similar, with only 0.03% (including SERPINB7 and CR2) and 0.2% of transcripts (including INHBA) differentially expressed at 1 and 4 weeks respectively. COL2A1, COMP, SPARC, CHAD, and EF1ALPHA were the most highly expressed non ribosomal, non mitochondrial genes in the controls and remained abundant after surgery. A total of 1,275 genes were differentially expressed between 1 and 4 weeks post-surgery. With the treatment groups pooled, 682 genes were differentially expressed at both time-points, with the most significant changes observed in MMP1, COCH, POSTN, CYTL1, and PTGFR. This study confirmed the development of a microscopic PTOA stage after ACL surgery in the porcine model. Upregulation of multiple proteases (including MMP1 and ADAMTS4) were found; however, the level of expression remained orders of magnitude below that of extracellular matrix protein-coding genes (including COL2A1 and ACAN). In summary, genes with established roles in PTOA as well as novel targets for specific intervention were identified. © 2017 Orthopaedic Research Society. Published by Wiley Periodicals, Inc. J Orthop Res 36:318-329, 2018.

Indexed as

Gene Expression ProfilingAnimalsAnterior Cruciate Ligament InjuriesCartilage, ArticularCollagen Type IICross-Sectional StudiesDisease Models, AnimalFemaleMaleMatrix Metalloproteinase 1Osteoarthritis, KneeSwineSwine, MiniatureCollagen Type IIMatrix Metalloproteinase 1ACLanimal modelcartilageosteoarthritisRNA-sequencing

Identifiers

PMID28671352
PMCPMC5752630
OpenAlexW2724486555

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.