ArticleBMC genomics2017
Genome-wide organization and expression profiling of the R2R3-MYB transcription factor family in pineapple (Ananas comosus).
Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.
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63 citing papers in PubMed.
- Identification of the R2R3-MYB transcription factor family in goji and LbaR2R3-MYB3 mediated wax biosynthesis enhancing powdery mildew resistance in tobacco.Plant cell reports · 2026Article
- Comprehensive analysis of the GeBP gene family in cucumber highlights functional divergence in fruit development and stress tolerance.BMC plant biology · 2026Article
- Genome-Wide Identification of the R2R3-MYB Gene Family Members in Masson Pine and the Regulation of Secondary Cell Wall Formation and Lignin Biosynthesis byPlants (Basel, Switzerland) · 2026Article
- Genome-wide analysis of the R2R3-MYB family reveals potential regulators of lignin and tricin metabolism in the model grass Setaria viridis.Molecular genetics and genomics : MGG · 2026Article
- Genome-wide identification of GAPDH gene family and functional analysis of CaGAPC2-mediated autophagy during BWYV infection in pepper.BMC genomics · 2026Article
- Genome-wide characterization and expression profiling of MADS-box family genes during organ development and drought stress in Camelina sativa L.Scientific reports · 2025Article
- Overexpression of the Kiwifruit Transcription FactorPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2024Article
- Identification of MYC genes in four Cucurbitaceae species and their roles in the response to temperature stress.BMC genomics · 2024Article
- Identification and characterization of a new species of Taxus - Taxus qinlingensis by multiple taxonomic methods.BMC plant biology · 2024Article
- AcMYB266, a key regulator of the red coloration in pineapple peel: a case of subfunctionalization in tandem duplicated genes.Horticulture research · 2024Article
- Genome-Wide Identification and Expression Analysis Reveal bZIP Transcription Factors Mediated Hormones That Functions during Early Somatic Embryogenesis inPlants (Basel, Switzerland) · 2024Article
- Article
- BrMYB116 transcription factor enhances Cd stress tolerance by activating FIT3 in yeast and Chinese cabbage.Frontiers in plant science · 2024Article
- Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Plants (Basel, Switzerland) · 2023Article
- Genomic-wide identification and expression analysis of R2R3-MYB transcription factors related to flavonol biosynthesis in Morinda officinalis.BMC plant biology · 2023Article
- Physiological and gene expression responses involved in teak (Tectona grandis L.) seedlings exposed to osmotic and salt stressors.Molecular biology reports · 2023Article
- Modulation of Anthocyanin Biosynthesis-Related Genes during the Ripening ofInternational journal of molecular sciences · 2023Article
- Genome-Scale Analysis of the Grapevine KCS Genes Reveals Its Potential Role in Male Sterility.International journal of molecular sciences · 2023Article
- Genome-Wide Identification and Characterization ofInternational journal of molecular sciences · 2023Article
3 more citing papers are in PubMed but not listed here.
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8 authors.
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Abstract
backgroundThe MYB proteins comprise one of the largest families of plant transcription factors, which are involved in various plant physiological and biochemical processes. Pineapple (Ananas comosus) is one of three most important tropical fruits worldwide. The completion of pineapple genome sequencing provides a great opportunity to investigate the organization and evolutionary traits of pineapple MYB genes at the genome-wide level.
resultsIn the present study, a total of 94 pineapple R2R3-MYB genes were identified and further phylogenetically classified into 26 subfamilies, as supported by the conserved gene structures and motif composition. Collinearity analysis indicated that the segmental duplication events played a crucial role in the expansion of pineapple MYB gene family. Further comparative phylogenetic analysis suggested that there have been functional divergences of MYB gene family during plant evolution. RNA-seq data from different tissues and developmental stages revealed distinct temporal and spatial expression profiles of the AcMYB genes. Further quantitative expression analysis showed the specific expression patterns of the selected putative stress-related AcMYB genes in response to distinct abiotic stress and hormonal treatments. The comprehensive expression analysis of the pineapple MYB genes, especially the tissue-preferential and stress-responsive genes, could provide valuable clues for further function characterization.
conclusionsIn this work, we systematically identified AcMYB genes by analyzing the pineapple genome sequence using a set of bioinformatics approaches. Our findings provide a global insight into the organization, phylogeny and expression patterns of the pineapple R2R3-MYB genes, and hence contribute to the greater understanding of their biological roles in pineapple.
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