Evidence map›Paper›PMID 28667570›Full record

ArticleMolecular biotechnology2017

Molecular Cloning, Expression and Characterization of Oenococcus oeni Priming Glycosyltransferases.

Maria Dimopoulou, Olivier Claisse, Lucie Dutilh, Cécile Miot-Sertier, Patricia Ballestra, Patrick M Lucas, Marguerite Dols-Lafargue

Abstract read
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In one paragraph

Article in Molecular biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Frontiers in microbiology · 2018
    Article
  3. Characterization ofFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maria DimopoulouUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Olivier ClaisseUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Lucie DutilhUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Cécile Miot-SertierUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Patricia BallestraUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Patrick M LucasUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France.
Marguerite Dols-LafargueUniv. Bordeaux, ISVV, EA 4577 Œnologie, 33140, Villenave d'Ornon, France. dols@enscbp.fr.ORCID http://orcid.org/0000-0002-7273-1561

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oenococcus oeni is the main bacterial species that drives malolactic fermentation in wine. Most O. oeni strains produce capsular exopolysaccharides (EPS) that may contribute to protect them in the wine hostile environment. In O. oeni genome sequences, several genes are predicted to encode priming glycosyltransferases (pGTs). These enzymes are essential for EPS formation as they catalyze the first biosynthetic step through the formation of a phosphoanhydride bond between a hexose-1-phosphate and a lipid carrier undecaprenyl phosphate. In many microorganisms, mutations abolishing the pGT activity also abolish the EPS formation. We first made an in silico analysis of all the genes encoding putative pGT over 50 distinct O. oeni genome sequences. Two polyisoprenyl-phosphate-hexose-1-phosphate transferases, WoaA and WobA, and a glycosyltransferase (It3) were particularly examined for their topology and amino acid sequence. Several isoforms of these enzymes were then expressed in E. coli, and their substrate specificity was examined in vitro. The substrate specificity varied depending on the protein isoform examined, and several mutations were shown to abolish WobA activity but not EPS synthesis. Further analysis of woaA and wobA gene expression levels suggests that WoaA could replace the deficient WobA and maintain EPS formation.

Indexed as

Amino AcidsAmino Acid SequenceChromosomes, BacterialCloning, MolecularConserved SequenceEnzyme AssaysEscherichia coliGene Expression Regulation, BacterialGenes, BacterialGlycosyltransferasesHydrophobic and Hydrophilic InteractionsMultigene FamilyOenococcusPhylogenySpecies SpecificityAmino AcidsGlycosyltransferasesExopolysaccharideOenococcus oeniPriming glycosyltransferase

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.