Evidence map›Paper›PMID 28667402›Full record

ArticleMycorrhiza2017

Phylogenetic, structural, and functional characterization of AMT3;1, an ammonium transporter induced by mycorrhization among model grasses.

Sally Koegel, Delphine Mieulet, Sefer Baday, Odile Chatagnier, Moritz F Lehmann, Andres Wiemken, Thomas Boller, Daniel Wipf, Simon Bernèche, Emmanuel Guiderdoni and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Mycorrhiza, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. OsNLP3 and OsPHR2 orchestrate direct and mycorrhizal pathways for nitrate uptake by regulating NAR2.1-NRT2s complexes in rice.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. International journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Function and Regulation of Ammonium Transporters in Plants.International journal of molecular sciences · 2020
    Review
  18. Improvement of nutrient use efficiency in rice: current toolbox and future perspectives.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sally KoegelDepartment of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland.
Delphine MieuletCIRAD, UMR AGAP, 34398, Montpellier Cedex 5, France.
Sefer BadaySIB Swiss Institute of Bioinformatics and Biozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Odile ChatagnierAgroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
Moritz F LehmannDepartment of Environmental Sciences, Aquatic and Stable Isotope Biogeochemistry, University of Basel, Basel, Switzerland.
Andres WiemkenDepartment of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland.
Thomas BollerDepartment of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland.
Daniel WipfAgroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
Simon BernècheSIB Swiss Institute of Bioinformatics and Biozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Emmanuel GuiderdoniCIRAD, UMR AGAP, 34398, Montpellier Cedex 5, France.
Pierre-Emmanuel CourtyDepartment of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland. pierre-emmanuel.courty@inra.fr.ORCID http://orcid.org/0000-0003-2789-7818

Funding

germaine de stael TRANS- BIO 26510SGSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 130794Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung PP00P3_139205Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung PZ00P3_136651Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (CH) 127563
6 · The paper itself

Abstract

In the arbuscular mycorrhizal (AM) symbiosis, plants satisfy part of their nitrogen (N) requirement through the AM pathway. In sorghum, the ammonium transporters (AMT) AMT3;1, and to a lesser extent AMT4, are induced in cells containing developing arbuscules. Here, we have characterized orthologs of AMT3;1 and AMT4 in four other grasses in addition to sorghum. AMT3;1 and AMT4 orthologous genes are induced in AM roots, suggesting that in the common ancestor of these five plant species, both AMT3;1 and AMT4 were already present and upregulated upon AM colonization. An artificial microRNA approach was successfully used to downregulate either AMT3;1 or AMT4 in rice. Mycorrhizal root colonization and hyphal length density of knockdown plants were not affected at that time, indicating that the manipulation did not modify the establishment of the AM symbiosis and the interaction between both partners. However, expression of the fungal phosphate transporter FmPT was significantly reduced in knockdown plants, indicating a reduction of the nutrient fluxes from the AM fungus to the plant. The AMT3;1 knockdown plants (but not the AMT4 knockdown plants) were significantly less stimulated in growth by AM fungal colonization, and uptake of both

Indexed as

Cation Transport ProteinsFungal ProteinsMycorrhizaePhosphate Transport ProteinsPhylogenyPlant ProteinsPoaceaeSequence Analysis, DNAammonium transporters, plantCation Transport ProteinsFungal ProteinsPhosphate Transport ProteinsPlant ProteinsAM-inducible ammonium transporterArbuscular mycorrhizal symbiosisArtificial microRNACereal plantsN transferYeast complementation

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.