Evidence map›Paper›PMID 28667334›Full record

ArticleScientific reports2017

3'UTR polymorphisms of carbonic anhydrase IX determine the miR-34a targeting efficiency and prognosis of hepatocellular carcinoma.

Kuo-Tai Hua, Yu-Fan Liu, Chia-Lang Hsu, Tsu-Yao Cheng, Ching-Yao Yang, Jeng-Shou Chang, Wei-Jiunn Lee, Michael Hsiao, Hsueh-Fen Juan, Ming-Hsien Chien and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

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  20. FGFR4 Gene Polymorphism Reduces the Risk of Distant Metastasis in Lung Adenocarcinoma in Taiwan.International journal of environmental research and public health · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Kuo-Tai HuaGraduate Institute of Toxicology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Yu-Fan LiuDepartment of Biomedical Sciences, Chung Shan Medical University, Taichung, Taiwan.
Chia-Lang HsuDepartment of Life Science, Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan.
Tsu-Yao ChengDepartment of Laboratory Medicine, National Taiwan University Hospital, Taipei, Taiwan.
Ching-Yao YangDepartment of Surgery, National Taiwan University Hospital, and National Taiwan University College of Medicine, Taipei, Taiwan.
Jeng-Shou ChangGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Wei-Jiunn LeeWan Fang Hospital, Taipei Medical University, Taipei, Taiwan.
Michael HsiaoGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Hsueh-Fen JuanDepartment of Life Science, Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan.ORCID 0000-0003-4876-3309
Ming-Hsien ChienWan Fang Hospital, Taipei Medical University, Taipei, Taiwan. mhchien1976@gmail.com.
Shun-Fa YangDepartment of Medical Research, Chung Shan Medical University Hospital, Taichung, Taiwan. ysf@csmu.edu.tw.
National Taiwan University · TWChung Shan Medical University Hospital · TWGenomics Research Center, Academia Sinica · TWNational Taiwan University Hospital · TWTaipei Medical University Hospital · TWWan Fang Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbonic anhydrase IX (CA9) expression level has been considered as a poor prognostic factor in hepatocellular carcinoma (HCC) patients. However, the judging criteria of CA9 level is hard to define for potential clinical applications. Unlike CA9 expression level, CA9 polymorphism is poorly documented in HCC. Here, we found that people carry A allele at CA9 rs1048638, a 3'UTR SNP, has higher risk of HCC. rs1048638-CA correlates with advanced stages, larger tumor sizes, more vascular invasion, and shorter survival of HCC patients. A allele at CA9 rs1048638 impairs miR-34a, a tumor suppressor miRNA in HCC, binding to CA9 3'UTR and desensitizes CA9 mRNA to miR-34a-dependent RNA degradation. CA9 expression levels were also correlated with miR-34a levels and rs1048638 genotypes in HCC patients. rs1048638 influences HCC risk and progression through effects on miR-34a-targeted CA9 expression in HCC. In conclusion, genetic variations of the CA9 3'UTR play important roles in regulating CA9 expression and cancer progression, which is a novel determinant and target for HCC metastasis and prognosis.

Indexed as

3' Untranslated RegionsPolymorphism, Single NucleotideRNA InterferenceAllelesBiomarkers, TumorCarbonic Anhydrase IXCarcinoma, HepatocellularCell MovementCell ProliferationGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseGenotypeHumansKaplan-Meier EstimateLiver NeoplasmsMicroRNAs3' Untranslated RegionsBiomarkers, TumorCarbonic Anhydrase IXMicroRNAsMIRN34 microRNA, human

Identifiers

PMID28667334
PMCPMC5493636
OpenAlexW2712297419

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.