Evidence map›Paper›PMID 28667320›Full record

ArticleScientific reports2017

Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01.

Heng Zhang, Xuran Xu, Xiao Chen, Fanshu Yuan, Bianjing Sun, Yunhua Xu, Jiazhi Yang, Dongping Sun

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Elevated abundance ofCurrent research in food science · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Characterization of the Putative Acylated Cellulose Synthase Operon inInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. The Roles of the Various Cellulose Biosynthesis Operons inApplied and environmental microbiology · 2022
    Article
  17. Characterization ofMicroorganisms · 2021
    Article
  18. Comparative Genome Analysis of ThreeFrontiers in microbiology · 2021
    Article
  19. Description ofMicroorganisms · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Heng ZhangChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China.
Xuran XuChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China.
Xiao ChenChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China.
Fanshu YuanChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China.
Bianjing SunChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China.
Yunhua XuDepartment of Life Sciences, Lianyungang Normal College, Lianyungang, 222000, China.
Jiazhi YangChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China. jiazhiyang@sina.com.
Dongping SunChemicobiology and Functional Materials Institute, Nanjing University of Science and Technology, Nanjing, 210094, China. sundpe301@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Komagataeibacter nataicola is an acetic acid bacterium (AAB) that can produce abundant bacterial cellulose and tolerate high concentrations of acetic acid. To globally understand its fermentation characteristics, we present a high-quality complete genome sequence of K. nataicola RZS01. The genome consists of a 3,485,191-bp chromosome and 6 plasmids, which encode 3,514 proteins and bear three cellulose synthase operons. Phylogenetic analysis at the genome level provides convincing evidence of the evolutionary position of K. nataicola with respect to related taxa. Genomic comparisons with other AAB revealed that RZS01 shares 36.1%~75.1% of sequence similarity with other AAB. The sequence data was also used for metabolic analysis of biotechnological substrates. Analysis of the resistance to acetic acid at the genomic level indicated a synergistic mechanism responsible for acetic acid tolerance. The genomic data provide a viable platform that can be used to understand and manipulate the phenotype of K. nataicola RZS01 to further improve bacterial cellulose production.

Indexed as

Genome, BacterialGenomicsAdaptation, BiologicalAlphaproteobacteriaCelluloseGene OrderOpen Reading FramesPhylogenyStress, PhysiologicalWhole Genome SequencingCellulose

Identifiers

PMID28667320
PMCPMC5493696

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.