Evidence map›Paper›PMID 28667017›Full record

ArticleG3 (Bethesda, Md.)2017

FlyExpress 7: An Integrated Discovery Platform To Study Coexpressed Genes Using

Sudhir Kumar, Charlotte Konikoff, Maxwell Sanderford, Li Liu, Stuart Newfeld, Jieping Ye, Rob J Kulathinal

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Development (Cambridge, England) · 2018
    Article
  3. Xio is a component of theProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sudhir KumarInstitute for Genomic and Evolutionary Medicine and.
Charlotte KonikoffInstitute for Genomic and Evolutionary Medicine and.
Maxwell SanderfordInstitute for Genomic and Evolutionary Medicine and.
Li LiuDepartment of Biomedical Informatics and.
Stuart NewfeldSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287.
Jieping YeDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan 48109.
Rob J KulathinalInstitute for Genomic and Evolutionary Medicine and robkulathinal@temple.edu.
Arizona State University · USTemple University · USUniversity of Michigan–Ann Arbor · US

Funding

Computatonal Analysis of Gene Expression Pattern ImagesR01HG002516 · NHGRI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI KUMAR, SUDHIR · 2003 to 2013
$5.3M
NHGRI NIH HHS R01 HG002516
6 · The paper itself

Abstract

Gene expression patterns assayed across development can offer key clues about a gene's function and regulatory role.

Indexed as

Gene Expression RegulationImaging, Three-DimensionalIn Situ HybridizationSoftwareAnimalsBinding SitesConserved SequenceDrosophila melanogasterGenome, InsectTranscription FactorsTranscription Factorsdotplotembryonic expression patternsgene regulationimage analysisintergenic regions

Identifiers

PMID28667017
PMCPMC5555482
OpenAlexW2731798131

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.