Evidence map›Paper›PMID 28662174›Full record

ArticlePloS one2017

A synthetic multi-cellular network of coupled self-sustained oscillators.

Miguel Fernández-Niño, Daniel Giraldo, Judith Lucia Gomez-Porras, Ingo Dreyer, Andrés Fernando González Barrios, Catalina Arevalo-Ferro

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Miguel Fernández-NiñoDepartamento de Biología, Universidad Nacional de Colombia, Bogotá, Colombia.ORCID http://orcid.org/0000-0002-8231-7989
Daniel GiraldoGrupo de Diseño de Productos y Procesos (GDPP), Departamento de Ingeniería Química, Universidad de los Andes, Bogotá DC, Colombia.
Judith Lucia Gomez-PorrasCentro de Bioinformática y Simulación Molecular (CBSM), Universidad de Talca, Talca, Chile.
Ingo DreyerCentro de Bioinformática y Simulación Molecular (CBSM), Universidad de Talca, Talca, Chile.
Andrés Fernando González BarriosGrupo de Diseño de Productos y Procesos (GDPP), Departamento de Ingeniería Química, Universidad de los Andes, Bogotá DC, Colombia.
Catalina Arevalo-FerroDepartamento de Biología, Universidad Nacional de Colombia, Bogotá, Colombia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineering artificial networks from modular components is a major challenge in synthetic biology. In the past years, single units, such as switches and oscillators, were successfully constructed and implemented. The effective integration of these parts into functional artificial self-regulated networks is currently on the verge of breakthrough. Here, we describe the design of a modular higher-order synthetic genetic network assembled from two independent self-sustained synthetic units: repressilators coupled via a modified quorum-sensing circuit. The isolated communication circuit and the network of coupled oscillators were analysed in mathematical modelling and experimental approaches. We monitored clustering of cells in groups of various sizes. Within each cluster of cells, cells oscillate synchronously, whereas the theoretical modelling predicts complete synchronization of the whole cellular population to be obtained approximately after 30 days. Our data suggest that self-regulated synchronization in biological systems can occur through an intermediate, long term clustering phase. The proposed artificial multicellular network provides a system framework for exploring how a given network generates a specific behaviour.

Indexed as

Neural Networks, ComputerBacterial Physiological PhenomenaBacterial ProteinsGreen Fluorescent ProteinsModels, BiologicalQuorum SensingBacterial ProteinsGreen Fluorescent Proteins

Identifiers

PMID28662174
PMCPMC5491139

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.