Evidence map›Paper›PMID 28662128›Full record

ArticlePloS one2017

Molecular and functional characterization of two isoforms of chalcone synthase and their expression analysis in relation to flavonoid constituents in Grewia asiatica L.

Tareq A Wani, Shahzad A Pandith, Ajai P Gupta, Suresh Chandra, Namrata Sharma, Surrinder K Lattoo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  6. Spasmolytic Effect ofEvidence-based complementary and alternative medicine : eCAM · 2021
    Article
  7. Article
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  9. Review
  10. Article
  11. Phytochemistry reviews : proceedings of the Phytochemical Society of Europe · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tareq A WaniGenetic Resources and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi, India.
Shahzad A PandithPlant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi, India.
Ajai P GuptaQuality Control and Quality Assurance Division, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi, India.
Suresh ChandraGenetic Resources and Agrotechnology Division, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi, India.
Namrata SharmaDepartment of Botany, University of Jammu, Jammu Tawi, India.
Surrinder K LattooPlant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi, India.ORCID http://orcid.org/0000-0002-8902-3713
Indian Institute of Integrative Medicine · INUniversity of Jammu · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chalcone synthase constitutes a functionally diverse gene family producing wide range of flavonoids by catalyzing the initial step of the phenylpropanoid pathway. There is a pivotal role of flavonoids in pollen function as they are imperative for pollen maturation and pollen tube growth during sexual reproduction in flowering plants. Here we focused on medicinally important fruit-bearing shrub Grewia asiatica. It is a rich repository of flavonoids. The fruits are highly acclaimed for various putative health benefits. Despite its importance, full commercial exploitation is hampered due to two drawbacks which include short shelf life of its fruits and larger seed volume. To circumvent these constraints, seed abortion is one of the viable options. Molecular interventions tested in a number of economic crops have been to impair male reproductive function by disrupting the chalcone synthase (CHS) gene activity. Against this backdrop the aim of the present study included cloning and characterization of two full-length cDNA clones of GaCHS isoforms from the CHS multigene family. These included GaCHS1 (NCBI acc. KX129910) and GaCHS2 (NCBI acc. KX129911) with an ORF of 1176 and 1170 bp, respectively. GaCHSs were heterologously expressed and purified in E. coli to validate their functionality. Functionality of CHS isoforms was also characterized via enzyme kinetic studies using five different substrates. We observed differential substrate specificities in terms of their Km and Vmax values. Accumulation of flavonoid constituents naringenin and quercetin were also quantified and their relative concentrations corroborated well with the expression levels of GaCHSs. Further, our results demonstrate that GaCHS isoforms show differential expression patterns at different reproductive phenological stages. Transcript levels of GaCHS2 were more than its isoform GaCHS1 at the anthesis stage of flower development pointing towards its probable role in male reproductive maturity.

Indexed as

Gene Expression Regulation, EnzymologicAcyltransferasesAmino Acid SequenceChromatography, High Pressure LiquidFlavonoidsGrewiaIsoenzymesKineticsPhylogenySequence Homology, Amino AcidSpectrometry, Mass, Electrospray IonizationAcyltransferasesflavanone synthetaseFlavonoidsIsoenzymes

Identifiers

PMID28662128
PMCPMC5491003
OpenAlexW2730178668

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.