Evidence map›Paper›PMID 28662044›Full record

ArticlePloS one2017

Whole genome structural analysis of Caribbean hair sheep reveals quantitative link to West African ancestry.

Gordon L Spangler, Benjamin D Rosen, Moses Babatunde Ilori, Olivier Hanotte, Eui-Soo Kim, Tad S Sonstegard, Joan M Burke, James L M Morgan, David R Notter, Curtis P Van Tassell

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Recent advances in the genomic resources for sheep.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Gordon L SpanglerAnimal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, Maryland, United States of America.
Benjamin D RosenAnimal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, Maryland, United States of America.ORCID http://orcid.org/0000-0001-9395-8346
Moses Babatunde IloriSchool of Life Sciences, University of Nottingham, Nottingham, United Kingdom.
Olivier HanotteSchool of Life Sciences, University of Nottingham, Nottingham, United Kingdom.
Eui-Soo KimAcceligen of Recombinetics Incorporated, Saint Paul, Minnesota, United States of America.
Tad S SonstegardAcceligen of Recombinetics Incorporated, Saint Paul, Minnesota, United States of America.
Joan M BurkeDale Bumpers Small Farms Research Station, Agricultural Research Service, United States Department of Agriculture, Booneville, Arkansas, United States of America.
James L M MorganKatahdin Hair Sheep International, Fayetteville, Arkansas, United States of America.
David R NotterDepartment of Animal and Poultry Sciences, Virginia Tech, Blacksburg, Virginia, United States of America.
Curtis P Van TassellAnimal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, Maryland, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hair sheep of Caribbean origin have become an important part of the U.S. sheep industry. Their lack of wool eliminates a number of health concerns and drastically reduces the cost of production. More importantly, Caribbean hair sheep demonstrate robust production performance even in the presence of drug-resistant gastrointestinal nematodes, a rising concern to the industry. Despite the growing importance of hair sheep in the Americas their genetic origins have remained speculative. Prior to this report no genetic studies were able to identify a unique geographical origin of hair sheep in the New World. Our study clarifies the African and European ancestry of Caribbean hair sheep. Whole-genome structural analysis was conducted on four established breeds of hair sheep from the Caribbean region. Using breeds representing Africa and Europe we establish an objective measure indicating Caribbean hair sheep are derived from Iberian and West African origins. Caribbean hair sheep result from West African introgression into established ecotypes of Iberian descent. Genotypes from 47,750 autosomal single nucleotide polymorphism markers scored in 290 animals were used to characterize the population structure of the St. Croix, Barbados Blackbelly, Morada Nova, and Santa Ines. Principal components, admixture, and phylogenetic analyses results correlate with historical patterns of colonization and trade. These patterns support co-migration of these sheep with humans.

Indexed as

Africa, WesternAnimalsPrincipal Component AnalysisSheepWest Indies

Identifiers

PMID28662044
PMCPMC5490989

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.