Evidence map›Paper›PMID 28660881›Full record

ArticleNature communications2017

Ten-eleven translocation 2 interacts with forkhead box O3 and regulates adult neurogenesis.

Xuekun Li, Bing Yao, Li Chen, Yunhee Kang, Yujing Li, Ying Cheng, Liping Li, Li Lin, Zhiqin Wang, Mengli Wang and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Genetic ablation of the TET family in retinal progenitor cells impairs photoreceptor development and leads to blindness.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. The Epigenetic Role of Vitamin C in Neurodevelopment.International journal of molecular sciences · 2022
    Review
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Xuekun LiThe Children's Hospital and Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou 310029, China.
Bing YaoDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Li ChenDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322, USA.
Yunhee KangDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Yujing LiDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Ying ChengDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Liping LiThe Children's Hospital and Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou 310029, China.
Li LinGuangdong-Hongkong-Macau Institute of CNS Regeneration, Joint International Research Laboratory of CNS Regeneration, Ministry of Education of PRC, Jinan University, Guangzhou 510632, PR China.
Zhiqin WangDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Mengli WangDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
Feng PanSylvester Comprehensive Cancer Center, Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, Miami, Florida 33136, USA.
Qing DaiDepartment of Chemistry, University of Chicago, Chicago, Ilinois 60637, USA.ORCID 0000-0002-8578-1568
Wei ZhangCollege of Business, Iowa State University, Ames, Iowa 50011, USA.
Hao WuDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322, USA.
Qiang ShuThe Children's Hospital and Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou 310029, China.
Zhaohui QinDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322, USA.ORCID 0000-0002-1583-146X
Chuan HeDepartment of Chemistry, University of Chicago, Chicago, Ilinois 60637, USA.
Mingjiang XuSylvester Comprehensive Cancer Center, Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, Miami, Florida 33136, USA.
Peng JinThe Children's Hospital and Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou 310029, China.ORCID 0000-0001-6137-6659
Emory University · USChildren's Hospital of Zhejiang University · CNUniversity of Illinois Chicago · USUniversity of Miami · USIowa State University · USJinan University · CN

Funding

Transcriptome-wide base-resolution sequencing of pseudouridine in human normal and AD brain tissues-CEGS Admin supplement 2020-2021RM1HG008935 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2016 to 2025
$24.4M
Molecular Basis of rCGG-Mediated NeurodegenerationR01NS051630 · NINDS · EMORY UNIVERSITY · PI NELSON, DAVID LOREN · 2006 to 2023
$9.8M
Translational models of neurodevelopmental epigenetics and disease using human iPSCsP01NS097206 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI SONG, HONGJUN · 2016 to 2020
$4.3M
Tet-mediated Epigenetic Modulation in AutismR01MH102690 · NIMH · EMORY UNIVERSITY · PI JIN, PENG, WARREN, STEPHEN T. · 2014 to 2017
$2.6M
5-Hydroxymethylcytosine in NeurodevelopmentR01NS079625 · NINDS · EMORY UNIVERSITY · PI JIN, PENG · 2012 to 2016
$1.7M
NHGRI NIH HHS RM1 HG008935NIMH NIH HHS R01 MH102690NINDS NIH HHS P01 NS097206NINDS NIH HHS R01 NS051630NINDS NIH HHS R01 NS079625
6 · The paper itself

Abstract

Emerging evidence suggests that active DNA demethylation machinery plays important epigenetic roles in mammalian adult neurogenesis; however, the precise molecular mechanisms and critical functional players of DNA demethylation in this process remain largely unexplored. Ten-eleven translocation (Tet) proteins convert 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) and its downstream derivatives. Here we show that 5hmC is elevated during the differentiation of adult neural stem cells (aNSCs), and Tet2 is primarily responsible for modulating 5hmC dynamics. Depletion of Tet2 leads to increased aNSC proliferation and reduced differentiation in vitro and in vivo. Genome-wide transcriptional analyses reveal important epigenetic roles of Tet2 in maintaining the transcriptome landscape related to neurogenesis. Mechanistically, transcription factor forkhead box O3 (Foxo3a) physically interacts with Tet2 and regulates the expression of genes related to aNSC proliferation. These data together establish an important role for the Tet2-Foxo3a axis in epigenetically regulating critical genes in aNSCs during adult neurogenesis.

Indexed as

Neurogenesis5-MethylcytosineAnimalsCell ProliferationCells, CulturedDioxygenasesDNA-Binding ProteinsForkhead Box Protein O3Gene Expression RegulationMaleMice, KnockoutNeural Stem CellsProtein BindingProto-Oncogene Proteins5-hydroxymethylcytosine5-MethylcytosineDioxygenasesDNA-Binding ProteinsForkhead Box Protein O3FoxO3 protein, mouseProto-Oncogene ProteinsTet2 protein, mouse

Identifiers

PMID28660881
PMCPMC5493768
OpenAlexW2733626821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.