Evidence map›Paper›PMID 28660315›Full record

ArticleThe protein journal2017

Characterization of the Dihydroorotase from Methanococcus jannaschii.

Jacqueline Vitali, Aditya K Singh, Michael J Colaneri

Open access · greenAbstract read
In one paragraph

Article in The protein journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Crystal structure of Methanococcus jannaschii dihydroorotase with substrate bound.Acta crystallographica. Section F, Structural biology communications · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jacqueline VitaliDepartment of Physics, Cleveland State University, Cleveland, OH, 44115, USA. j.vitali@csuohio.edu.ORCID 0000-0003-3029-8496
Aditya K SinghDepartment of Physics, Cleveland State University, Cleveland, OH, 44115, USA.
Michael J ColaneriDepartment of Chemistry and Physics, State University of New York at Old Westbury, Old Westbury, NY, 11568, USA.
Cleveland State University · USSUNY Old Westbury · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Asymmetric flow FFF and Composition Gradient/Light Scattering SystemS10RR023748 · NCRR · YALE UNIVERSITY · PI FOLTA-STOGNIEW, EWA JOANNA · 2007 to 2007
$271k
Structural Studies of the Pyrimidine PathwayR15GM071512 · NIGMS · CLEVELAND STATE UNIVERSITY · PI VITALI, JACQUELINE · 2004 to 2004
$210k
NCRR NIH HHS S10 RR023748NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R15 GM071512
6 · The paper itself

Abstract

The gene that codes for the putative dihydroorotase in the hyperthermophilic archaeon Methanococcus jannaschii was subcloned in pET-21a and expressed in Escherichia coli. A purification protocol was devised. The purity of the protein was evaluated by SDS-PAGE and the protein was confirmed by sequencing using LC-MS. The calculated molecular mass is 48104 Da. SEC-LS suggested that the protein is a monomer in solution. ICP-MS showed that there are two Zn ions per monomer. Kinetic analysis of the recombinant protein gave hyperbolic kinetics with V

Indexed as

Amino Acid SequenceArchaeal ProteinsBacillus anthracisBinding SitesCloning, MolecularConserved SequenceDihydroorotaseEnzyme StabilityEscherichia coliGene ExpressionKineticsMethanocaldococcusMolecular WeightOpen Reading FramesPlasmidsProtein BindingArchaeal ProteinsDihydroorotaseRecombinant ProteinsZincDihydroorotaseEnzyme kineticsHomology modelingMethanococcus jannaschiiPyrimidine biosynthesisThermostability

Identifiers

PMID28660315
PMCPMC5624517
OpenAlexW2727469764

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.