ReviewPlanta2017
Variations on a theme in fruit development: the PLE lineage of MADS-box genes in tomato (TAGL1) and other species.
Review in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed, 72 citations in OpenAlex.
- Molecular Regulatory Mechanism of Inflorescence, Flower and Fruit Development in Tomato.Plants (Basel, Switzerland) · 2026Review
- Research Progress on the Regulation of Plant Floral Organ Development by theInternational journal of molecular sciences · 2025Review
- Overexpression ofPlants (Basel, Switzerland) · 2025Article
- A SEPALLATA MADS-Box Transcription Factor, SlMBP21, Functions as a Negative Regulator of Flower Number and Fruit Yields in Tomato.Plants (Basel, Switzerland) · 2024Article
- Two SEPALLATA MADS-Box Genes,International journal of molecular sciences · 2024Article
- Gene expression analysis during the fruit development in dehiscent and indehiscentPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022Article
- Comparative transcriptome and weighted correlation network analyses reveal candidate genes involved in chlorogenic acid biosynthesis in sweet potato.Scientific reports · 2022Article
- Identification of Candidate Chromosome Region Related to Melon (Frontiers in plant science · 2022Article
- Functional analysis of the ScAG and ScAGL11 MADS-box transcription factors for anthocyanin biosynthesis and bicolour pattern formation inHorticulture research · 2022Article
- Tissue-specific transcriptomics reveals a central role ofForestry research · 2022Article
- Comparative anatomy and genetic bases of fruit development in selected Rubiaceae (Gentianales).American journal of botany · 2021Article
- Multiple and integrated functions of floral C-class MADS-box genes in flower and fruit development of Physalis floridana.Plant molecular biology · 2021Article
- CcBLH6, a bell-like homeodomain-containing transcription factor, regulates the fruit lignification pattern.Planta · 2021Article
- Identification, characterization and functional analysis of AGAMOUS subfamily genes associated with floral organs and seed development in Marigold (Tagetes erecta).BMC plant biology · 2020Article
- FRUITFULL Is a Repressor of Apical Hook Opening inInternational journal of molecular sciences · 2020Article
- Genome-wide identification and analysis of long noncoding RNAs (lncRNAs) during seed development in peanut (Arachis hypogaea L.).BMC plant biology · 2020Article
- RNAi of AGAMOUS genes in sweetgum alters reproductive organ identity and decreases fruit persistence.Plant direct · 2020Article
- The Physiological and Molecular Mechanism of Abscisic Acid in Regulation of Fleshy Fruit Ripening.Frontiers in plant science · 2020Review
- Linkage Mapping and Comparative Transcriptome Analysis of Firmness in Watermelon (Frontiers in plant science · 2020Article
- Beyond Ethylene: New Insights Regarding the Role of Alternative Oxidase in the Respiratory Climacteric.Frontiers in plant science · 2020Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MAIN
conclusionThis article focuses on the role of TOMATO AGAMOUS-LIKE 1 (TAGL1) on a wide range of ripening functions in tomato. We also examine orthologs of this gene in related species that produce different fruit types and discuss some evolutionary implications. TOMATO AGAMOUS-LIKE 1 (TAGL1) is a MADS-box transcription factor gene that belongs to the PLENA (PLE) lineage within the AGAMOUS (AG) clade. The most well-studied genes in this lineage are the SHATTERPROOF (SHP) genes in Arabidopsis, known to be involved in dehiscence zone formation during silique development. In tomato, TAGL1 has been shown to control several aspects of tomato fruit ripening. Most notably, carotenoid synthesis seems to be controlled by TAGL1, likely via the ethylene synthesis and signaling pathway and in combination with RIPENING INHIBITOR (RIN). In addition, TAGL1 regulates genes involved in cell cycle regulation, flavonoid and lignin biosynthesis, and cuticle development. We discuss many of the genes in these different pathways that are likely controlled by TAGL1, directly or indirectly. We also examine the relationship of TAGL1 with known and putative interaction partners. PLE lineage genes have also been examined in other species such as Antirrhinum, Petunia, and Nicotiana and provide an interesting example of conservation and diversification of function in species that produce very different types of fleshy and dry fruits. The control of lignification may be a common mechanism for this group of genes. Lastly, we discuss future work needed to elucidate the TAGL1 regulatory pathway in tomato and to help better understand the functional diversification of genes in this lineage in related species.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.