Evidence map›Paper›PMID 28660060›Full record

ArticleChemical science2017

Coupling functionalized cobalt ferrite nanoparticle enrichment with online LC/MS/MS for top-down phosphoproteomics.

Bifan Chen, Leekyoung Hwang, William Ochowicz, Ziqing Lin, Tania M Guardado-Alvarez, Wenxuan Cai, Lichen Xiu, Kunal Dani, Cyrus Colah, Song Jin and 1 more

Abstract read
In one paragraph

Article in Chemical science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Top-down proteomics.Nature reviews. Methods primers · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Novel Strategies to Address the Challenges in Top-Down Proteomics.Journal of the American Society for Mass Spectrometry · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Top-Down Proteomics: Ready for Prime Time?Analytical chemistry · 2018
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Bifan ChenDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.ORCID 0000-0003-0379-0821
Leekyoung HwangDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.
William OchowiczDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.
Ziqing LinDepartment of Cell and Regenerative Biology , University of Wisconsin-Madison , Madison , WI , USA.
Tania M Guardado-AlvarezDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.
Wenxuan CaiDepartment of Cell and Regenerative Biology , University of Wisconsin-Madison , Madison , WI , USA.
Lichen XiuDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.
Kunal DaniDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.
Cyrus ColahDepartment of Cell and Regenerative Biology , University of Wisconsin-Madison , Madison , WI , USA.
Song JinDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.ORCID 0000-0001-8693-7010
Ying GeDepartment of Chemistry , University of Wisconsin-Madison , Madison , WI , USA . Email: ge2@wisc.edu.ORCID 0000-0001-5211-6812

Funding

Deciphering Myofilament Modifications in Ischemic CardiomyopathyR01HL109810 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2013 to 2024
$3.5M
Top Down Proteomics Of Myofilaments In Heart FailureR01HL096971 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2011 to 2021
$3.3M
Enabling Top-Down Proteomics through Materials Chemistry and NanotechnologyR01GM117058 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING, JIN, SONG · 2015 to 2023
$2.7M
Ultra High Resolution Mass Spectrometer for Biomedical ResearchS10OD018475 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2015 to 2015
$2.0M
NHLBI NIH HHS R01 HL096971NHLBI NIH HHS R01 HL109810NIGMS NIH HHS R01 GM117058NIH HHS S10 OD018475
6 · The paper itself

Abstract

Phosphorylation plays pivotal roles in cellular processes and dysregulated phosphorylation is considered as an underlying mechanism in many human diseases. Top-down mass spectrometry (MS) analyzes intact proteins and provides a comprehensive analysis of protein phosphorylation. However, top-down MS-based phosphoproteomics is challenging due to the difficulty in enriching low abundance intact phosphoproteins as well as separating and detecting the enriched phosphoproteins from complex mixtures. Herein, we have designed and synthesized the next generation functionalized superparamagnetic cobalt ferrite (CoFe

Identifiers

PMID28660060
PMCPMC5472028

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.