Evidence map›Paper›PMID 28658312›Full record

ArticlePloS one2017

Red rot resistant transgenic sugarcane developed through expression of β-1,3-glucanase gene.

Shivani Nayyar, Bipen Kumar Sharma, Ajinder Kaur, Anu Kalia, Gulzar Singh Sanghera, Karanjit Singh Thind, Inderjit Singh Yadav, Jagdeep Singh Sandhu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

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  10. Basic β-1,3-Glucanase fromPlants (Basel, Switzerland) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shivani NayyarSchool of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana, India.
Bipen Kumar SharmaPunjab Agricultural University, Regional Research Station, Kapurthala, India.
Ajinder KaurSchool of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana, India.
Anu KaliaElectron Microscopy and Nanoscience Laboratory, Punjab Agricultural University, Ludhiana, India.
Gulzar Singh SangheraPunjab Agricultural University, Regional Research Station, Kapurthala, India.
Karanjit Singh ThindDepartment of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, India.
Inderjit Singh YadavSchool of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana, India.
Jagdeep Singh SandhuSchool of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana, India.ORCID http://orcid.org/0000-0003-3743-2985
Punjab Agricultural University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane (Saccharum spp.) is a commercially important crop, vulnerable to fungal disease red rot caused by Colletotrichum falcatum Went. The pathogen attacks sucrose accumulating parenchyma cells of cane stalk leading to severe losses in cane yield and sugar recovery. We report development of red rot resistant transgenic sugarcane through expression of β-1,3-glucanase gene from Trichoderma spp. The transgene integration and its expression were confirmed by quantitative reverse transcription-PCR in first clonal generation raised from T0 plants revealing up to 4.4-fold higher expression, in comparison to non-transgenic sugarcane. Bioassay of transgenic plants with two virulent C. falcatum pathotypes, Cf 08 and Cf 09 causing red rot disease demonstrated that some plants were resistant to Cf 08 and moderately resistant to Cf 09. The electron micrographs of sucrose storing stalk parenchyma cells from these plants displayed characteristic sucrose-filled cells inhibiting Cf 08 hyphae and lysis of Cf 09 hyphae; in contrast, the cells of susceptible plants were sucrose depleted and prone to both the pathotypes. The transgene expression was up-regulated (up to 2.0-fold in leaves and 5.0-fold in roots) after infection, as compared to before infection in resistant plants. The transgene was successfully transmitted to second clonal generation raised from resistant transgenic plants. β-1,3-glucanase protein structural model revealed that active sites Glutamate 628 and Aspartate 569 of the catalytic domain acted as proton donor and nucleophile having role in cleaving β-1,3-glycosidic bonds and pathogen hyphal lysis.

Indexed as

ColletotrichumDisease ResistanceGene Expression Regulation, PlantGenes, PlantGlucan 1,3-beta-GlucosidasePlant DiseasesPlants, Genetically ModifiedReverse Transcriptase Polymerase Chain ReactionSaccharumTrichodermaGlucan 1,3-beta-Glucosidase

Identifiers

PMID28658312
PMCPMC5489175
OpenAlexW2726710120

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.