Evidence map›Paper›PMID 28657708›Full record

ArticleACS chemical neuroscience2018

Combined Proteomic-Molecular Epidemiology Approach to Identify Precision Targets in Brain Cancer.

Ekaterina Mostovenko, Yanhong Liu, E Susan Amirian, Spiridon Tsavachidis, Georgina N Armstrong, Melissa L Bondy, Carol L Nilsson

Open access · greenAbstract read
In one paragraph

Article in ACS chemical neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ekaterina MostovenkoDepartment of Anatomy, Virginia Commonwealth University , 1217 E. Marshall St., Richmond, Virginia 23284 United States.
Yanhong LiuDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine , Houston, Texas 77030, United States.
E Susan AmirianDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine , Houston, Texas 77030, United States.
Spiridon TsavachidisDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine , Houston, Texas 77030, United States.
Georgina N ArmstrongDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine , Houston, Texas 77030, United States.
Melissa L BondyDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine , Houston, Texas 77030, United States.
Carol L NilssonDepartment of Clinical Sciences, Lund University , SE-221 84 Lund, Sweden.ORCID 0000-0002-2838-8751
Baylor College of Medicine · USLund University · SEVirginia Commonwealth University · US

Funding

International Case Control Study of Malignant GliomaR01CA139020 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BONDY, MELISSA L. · 2010 to 2015
$16.0M
Genetic Epidemiology of Glioma International ConsortiumR01CA119215 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BONDY, MELISSA L. · 2006 to 2010
$11.9M
MOLECULAR EPIDEMIOLOGY OF GLIOMASR01CA070917 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI BONDY, MELISSA L · 1996 to 2004
$3.0M
Lung Cancer Prediction Models Incorporating Exome Data from Extreme PhenotypesK07CA181480 · NCI · BAYLOR COLLEGE OF MEDICINE · PI LIU, YANHONG · 2014 to 2017
$511k
NCI NIH HHS K07 CA181480NCI NIH HHS R01 CA070917NCI NIH HHS R01 CA119215NCI NIH HHS R01 CA139020
6 · The paper itself

Abstract

Primary brain tumors are predominantly malignant gliomas. Grade IV astrocytomas (glioblastomas, GBM) are among the most deadly of all tumors; most patients will succumb to their disease within 2 years of diagnosis despite standard of care. The grim outlook for brain tumor patients indicates that novel precision therapeutic targets must be identified. Our hypothesis is that the cancer proteomes of glioma tumors may contain protein variants that are linked to the aggressive pathology of the disease. To this end, we devised a novel workflow that combined variant proteomics with molecular epidemiological mining of public cancer data sets to identify 10 previously unrecognized variants linked to the risk of death in low grade glioma or GBM. We hypothesize that a subset of the protein variants may be successfully developed in the future as novel targets for malignant gliomas.

Indexed as

Drug DesignMolecular EpidemiologyPrecision MedicineProteomicsAdolescentAdultAgedAged, 80 and overBrain NeoplasmsData MiningFemaleGenetic Association StudiesGliomaHumansKaplan-Meier EstimateMaledrug targetGBMGlioblastomamolecular epidemiologyprecision medicineproteomic

Identifiers

PMID28657708
PMCPMC5764832
OpenAlexW2732866410

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.