Evidence map›Paper›PMID 28656603›Full record

Trial reportThe Prostate2017

A genetic variant near GATA3 implicated in inherited susceptibility and etiology of benign prostatic hyperplasia (BPH) and lower urinary tract symptoms (LUTS).

Rong Na, Brian T Helfand, Haitao Chen, Carly A Conran, Susan E Crawford, Simon W Hayward, Teuvo L J Tammela, Judy Hoffman-Bolton, Siqun L Zheng, Patrick C Walsh and 4 more

Open access · greenAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in The Prostate, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Rong NaProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Brian T HelfandProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Haitao ChenFudan University School of Public Health, Shanghai, China.
Carly A ConranProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Susan E CrawfordProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Simon W HaywardProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Teuvo L J TammelaDepartment of Urology, Tampere University Hospital and Medical School, University of Tampere, Tampere, Finland.
Judy Hoffman-BoltonDepartment of Epidemiology, Johns Hopkins University Bloomberg School of Public Health, Baltimore, Maryland.
Siqun L ZhengProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.
Patrick C WalshDepartment of Urology and the James Buchanan Brady Urologic Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Johanna SchleutkerDepartment of Medical Biochemistry and Genetics, University of Turku, Turku, Finland.
Elizabeth A PlatzDepartment of Epidemiology, Johns Hopkins University Bloomberg School of Public Health, Baltimore, Maryland.
William B IsaacsDepartment of Urology and the James Buchanan Brady Urologic Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Jianfeng XuProgram for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, Illinois.ORCID http://orcid.org/0000-0002-9419-6627
NorthShore University HealthSystem · USJohns Hopkins University · USFudan University · CNShanghai Medical College of Fudan University · CNTampere University Hospital · FIUniversity of Turku · FI

Funding

Pilot and Feasibility ProgramP50DK082998 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI GETZENBERG, ROBERT H. · 2009 to 2011
$3.3M
Clinical validity and utility of genomic targeted chemoprevention of PCaUC2CA148463 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI XU, JIANFENG · 2010 to 2010
$2.0M
Clinical validity and utility of genomic targeted chemoprevention of PCaRC2CA148463 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI XU, JIANFENG · 2009 to 2009
$2.0M
NCI NIH HHS RC2 CA148463NCI NIH HHS UC2 CA148463NIDDK NIH HHS P50 DK082998
6 · The paper itself

Abstract

backgroundBenign prostatic hyperplasia (BPH) and associated lower urinary tract symptoms (LUTS) are common conditions. Little is known about their etiologies except that studies have suggested a substantial heritable component. Our objective is to provide a comprehensive, genome-wide evaluation of inherited risks and possible mechanisms of etiology in BPH.

methodsWe performed a three-stage, genome-wide association study (GWAS) of men from three independent populations, the REduction by DUtasteride of prostate Cancer Events (REDUCE) trial, the CLUE II cohort, and a Finnish hospital-based population. DNA samples were genotyped using the Illumina HumanOmniExpress BeadChip in REDUCE and CLUE II, and using the Sequenom iPLEX system for the confirmation stage in the Finnish population. A logistic regression model was used to evaluate the association between each SNP and BPH/LUTS.

resultsFourteen SNPs reached P < 5.0 × 10

conclusionsRs17144046 located near GATA3 was significantly associated with BPH/LUTS in three independent populations, but did not reach a stringent GWAS significance level. Genetic variants of GATA3 may play a role in the inherited susceptibility and etiology of BPH/LUTS. Further research in this area is needed.

Indexed as

AgedCohort StudiesDouble-Blind MethodGATA3 Transcription FactorGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansLower Urinary Tract SymptomsMaleMiddle AgedPolymorphism, Single NucleotideProstatic HyperplasiaGATA3 protein, humanGATA3 Transcription FactorBPHgenome-wide association studyLUTS

Identifiers

PMID28656603
PMCPMC5565164
OpenAlexW2728129170

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.