Evidence map›Paper›PMID 28655597›Full record

ArticleEBioMedicine2017

Identification of Host Proteins Predictive of Early Stage Mycobacterium tuberculosis Infection.

Charles M Bark, Ameur M Manceur, LaShaunda L Malone, Mary Nsereko, Brenda Okware, Harriet K Mayanja, Moses L Joloba, Isabelle Rajotte, Marija Mentinova, Phyla Kay and 5 more

Abstract read
In one paragraph

Article in EBioMedicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Route of BCG administration determines success.Human vaccines & immunotherapeutics · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Towards new TB vaccines.Seminars in immunopathology · 2020
    Review
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Charles M BarkTuberculosis Research Unit, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA; Uganda-Case Western Reserve University Research Collaboration, Kampala, Uganda; Division of Infectious Diseases, MetroHealth Medical Center, Cleveland, OH, USA. Electronic address: cmb148@case.edu.
Ameur M ManceurCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
LaShaunda L MaloneTuberculosis Research Unit, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA; Uganda-Case Western Reserve University Research Collaboration, Kampala, Uganda.
Mary NserekoUganda-Case Western Reserve University Research Collaboration, Kampala, Uganda.
Brenda OkwareUganda-Case Western Reserve University Research Collaboration, Kampala, Uganda.
Harriet K MayanjaUganda-Case Western Reserve University Research Collaboration, Kampala, Uganda; Department of Medicine, College of Health Sciences, Makerere University, Kampala, Uganda.
Moses L JolobaUganda-Case Western Reserve University Research Collaboration, Kampala, Uganda; Department of Medical Microbiology, College of Health Sciences, Makerere University, Kampala, Uganda.
Isabelle RajotteCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
Marija MentinovaCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
Phyla KayCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
Seydina LoCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
Patrick TremblayCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.
Catherine M SteinTuberculosis Research Unit, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA; Uganda-Case Western Reserve University Research Collaboration, Kampala, Uganda.
W Henry BoomTuberculosis Research Unit, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA; Uganda-Case Western Reserve University Research Collaboration, Kampala, Uganda.
Eustache ParamithiotisCaprion Biosciences, 201 President-Kennedy Ave., Montreal, H2X 3Y7, Quebec, Canada.

Funding

Clinical and Translational Science Collaborative of ClevelandKL2TR000440 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$11.1M
Tuberculosis Prevention Research Unit /TBRU/-266095383N01AI095383 · NIAID · CASE WESTERN RESERVE UNIVERSITY · 2000 to 2005
$5.6M
NCATS NIH HHS KL2 TR000440NIAID NIH HHS HHSN272200800047CNIAID NIH HHS N01 AI070022NIAID NIH HHS N01 AI095383
6 · The paper itself

Abstract

The objective of this study was to identify blood-based protein biomarkers of early stage Mycobacterium tuberculosis (Mtb) infection. We utilized plasma and serum specimens from TB patients and their contacts (age≥12) enrolled in a household contact study in Uganda. In the discovery phase cross-sectional samples from 104 HIV-uninfected persons classified as either active TB, latent Mtb infection (LTBI), tuberculin skin test (TST) converters, or persistent TST-negative were analyzed. Two hundred eighty-nine statistically significant (false discovery rate corrected p<0.05) differentially expressed proteins were identified across all comparisons. Proteins associated with cellular immunity and lipid metabolism were induced early after Mtb infection. One hundred and fifty-nine proteins were selected for a targeted mass spectrometry assay. A set of longitudinal samples from 52 TST-negative subjects who converted to TST-positive or remained TST-negative were analyzed, and multivariate logistic regression was used to identify unique protein panels able to predict TST conversion with cross-validated AUC>0.85. Panel performance was confirmed with an independent validation set of longitudinal samples from 16 subjects. These candidate protein biomarkers may allow for the identification of recently Mtb infected individuals at highest risk for developing active TB and most likely to benefit from preventive therapy.

Indexed as

Host-Pathogen InteractionsMycobacterium tuberculosisProteomeProteomicsAdolescentAdultBiomarkersCross-Sectional StudiesFemaleHumansMaleReproducibility of ResultsROC CurveTuberculosisYoung AdultBiomarkersProteomeConverterLTBIProteomicsTuberculosis

Identifiers

PMID28655597
PMCPMC5514433

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.