Evidence map›Paper›PMID 28653849›Full record

ArticleJournal of medicinal chemistry2017

Structure-Based Design and Synthesis of Potent and Selective Matrix Metalloproteinase 13 Inhibitors.

Jun Yong Choi, Rita Fuerst, Anna M Knapinska, Alexander B Taylor, Lyndsay Smith, Xiaohang Cao, P John Hart, Gregg B Fields, William R Roush

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Matrix Metalloproteinase 14 in Corneal Neovascularization.International journal of molecular sciences · 2026
    Review
  2. Biological and Phytochemical Insights IntoFood science & nutrition · 2025
    Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Developments in Carbohydrate-Based Metzincin Inhibitors.Pharmaceuticals (Basel, Switzerland) · 2020
    Review
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jun Yong ChoiDepartment of Chemistry, Scripps Florida , 130 Scripps Way, Jupiter, Florida 33458, United States.
Rita FuerstDepartment of Chemistry, Scripps Florida , 130 Scripps Way, Jupiter, Florida 33458, United States.
Anna M KnapinskaDepartment of Chemistry & Biochemistry, Florida Atlantic University , Jupiter, Florida 33458, United States.
Alexander B TaylorDepartment of Biochemistry and Structural Biology and the X-ray Crystallography Core Laboratory, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
Lyndsay SmithDepartment of Chemistry & Biochemistry, Florida Atlantic University , Jupiter, Florida 33458, United States.
Xiaohang CaoDepartment of Biochemistry and Structural Biology and the X-ray Crystallography Core Laboratory, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
P John HartDepartment of Biochemistry and Structural Biology and the X-ray Crystallography Core Laboratory, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
Gregg B FieldsDepartment of Chemistry & Biochemistry, Florida Atlantic University , Jupiter, Florida 33458, United States.
William R RoushDepartment of Chemistry, Scripps Florida , 130 Scripps Way, Jupiter, Florida 33458, United States.ORCID 0000-0001-9785-5897

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Robin Jean Leach · 1991 to 2026
$59.1M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
New probes for matrix metalloproteinase 13R01AR063795 · NIAMS · TORREY PINES INST FOR MOLECULAR STUDIES · PI FIELDS, GREGG B · 2013 to 2015
$1.5M
NCI NIH HHS P30 CA054174NIAMS NIH HHS R01 AR063795NIGMS NIH HHS P41 GM103403
6 · The paper itself

Abstract

We describe the use of comparative structural analysis and structure-guided molecular design to develop potent and selective inhibitors (10d and (S)-17b) of matrix metalloproteinase 13 (MMP-13). We applied a three-step process, starting with a comparative analysis of the X-ray crystallographic structure of compound 5 in complex with MMP-13 with published structures of known MMP-13·inhibitor complexes followed by molecular design and synthesis of potent but nonselective zinc-chelating MMP inhibitors (e.g., 10a and 10b). After demonstrating that the pharmacophores of the chelating inhibitors (S)-10a, (R)-10a, and 10b were binding within the MMP-13 active site, the Zn

Indexed as

Chelating AgentsCrystallography, X-RayDrug DesignHumansMatrix Metalloproteinase 13Matrix Metalloproteinase InhibitorsModels, MolecularZincChelating AgentsMatrix Metalloproteinase 13Matrix Metalloproteinase InhibitorsZinc

Identifiers

PMID28653849
PMCPMC6420151

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.