Evidence map›Paper›PMID 28650978›Full record

ArticlePLoS neglected tropical diseases2017

A study of ticks and tick-borne livestock pathogens in Pakistan.

Shahid Karim, Khemraj Budachetri, Nabanita Mukherjee, Jaclyn Williams, Asma Kausar, Muhammad Jawadul Hassan, Steven Adamson, Scot E Dowd, Dmitry Apanskevich, Abdullah Arijo and 7 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 2 pooled it
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 2 syntheses or guidelines pooled it, 261 citations in OpenAlex.

  1. Pooled it
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49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Shahid KarimDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.ORCID http://orcid.org/0000-0001-5596-3304
Khemraj BudachetriDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Nabanita MukherjeeDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Jaclyn WilliamsDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Asma KausarDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Muhammad Jawadul HassanDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Steven AdamsonDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, United States of America.
Scot E DowdMolecular Research LP, Shallowater, TX, United States of America.
Dmitry ApanskevichInstitute of Arthropodology and Parasitology, Georgia Southern University, Statesboro, Georgia, United States of America.
Abdullah ArijoDepartment of Parasitology, Sindh Agricultural University, Tando Jam, Pakistan.
Zia Uddin SindhuDepartment of Parasitology, University of Agriculture, Faisalabad, Pakistan.
Muhammad Azam KakarFaculty of Veterinary and Animal Sciences, Lasbela University of Agriculture, Water and Marine Sciences, Lasbela, Balochistan, Pakistan.
Raja Muhammad Dilpazir KhanDepartment of Animal Husbandry, Muzaffarabad, Azad Jammu and Kashmir, Pakistan.
Shafiq UllahDepartment of Parasitology, University of Agriculture, Faisalabad, Pakistan.
Muhammad Sohail SajidDepartment of Parasitology, University of Agriculture, Faisalabad, Pakistan.
Abid AliDepartment of Zoology, Abdul Wali Khan University, Mardan, Pakistan.
Zafar IqbalDepartment of Parasitology, University of Agriculture, Faisalabad, Pakistan.
University of Southern Mississippi · USUniversity of Agriculture Faisalabad · PKAbdul Wali Khan University Mardan · PKGeorgia Southern University · USLasbela University of Agriculture Water and Marine Science · PKSindh Agriculture University · PKUniversity of Azad Jammu and Kashmir · PK

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
NIGMS NIH HHS P20 GM103476
6 · The paper itself

Abstract

backgroundAs obligate blood-feeding arthropods, ticks transmit pathogens to humans and domestic animals more often than other arthropod vectors. Livestock farming plays a vital role in the rural economy of Pakistan, and tick infestation causes serious problems with it. However, research on tick species diversity and tick-borne pathogens has rarely been conducted in Pakistan. In this study, a systematic investigation of the tick species infesting livestock in different ecological regions of Pakistan was conducted to determine the microbiome and pathobiome diversity in the indigenous ticks. METHODOLOGY/PRINCIPAL

findingsA total of 3,866 tick specimens were morphologically identified as 19 different tick species representing three important hard ticks, Rhipicephalus, Haemaphysalis and Hyalomma, and two soft ticks, Ornithodorus and Argas. The bacterial diversity across these tick species was assessed by bacterial 16S rRNA gene sequencing using a 454-sequencing platform on 10 of the different tick species infesting livestock. The notable genera detected include Ralstonia, Clostridium, Staphylococcus, Rickettsia, Lactococcus, Lactobacillus, Corynebacterium, Enterobacter, and Enterococcus. A survey of Spotted fever group rickettsia from 514 samples from the 13 different tick species generated rickettsial-specific amplicons in 10% (54) of total ticks tested. Only three tick species Rhipicephalus microplus, Hyalomma anatolicum, and H. dromedarii had evidence of infection with "Candidatus Rickettsia amblyommii" a result further verified using a rompB gene-specific quantitative PCR (qPCR) assay. The Hyalomma ticks also tested positive for the piroplasm, Theileria annulata, using a qPCR assay. CONCLUSIONS/SIGNIFICANCE: This study provides information about tick diversity in Pakistan, and pathogenic bacteria in different tick species. Our results showed evidence for Candidatus R. amblyommii infection in Rhipicephalus microplus, H. anatolicum, and H. dromedarii ticks, which also carried T. annulata.

Indexed as

LivestockMicrobiotaAnimalsBacteriaEctoparasitic InfestationsPakistanPolymerase Chain ReactionTheileria annulataTick-Borne DiseasesTicks

Identifiers

PMID28650978
PMCPMC5501686
OpenAlexW2667598734

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.