Evidence map›Paper›PMID 28650638›Full record

ArticleJournal of medicinal chemistry2017

Identification and Structure-Activity Relationships of Novel Compounds that Potentiate the Activities of Antibiotics in Escherichia coli.

Keith M Haynes, Narges Abdali, Varsha Jhawar, Helen I Zgurskaya, Jerry M Parks, Adam T Green, Jerome Baudry, Valentin V Rybenkov, Jeremy C Smith, John K Walker

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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  19. Discovery of multidrug efflux pump inhibitors with a novel chemical scaffold.Biochimica et biophysica acta. General subjects · 2020
    Article
  20. Novel 1,2,4-Oxadiazole Derivatives in Drug Discovery.Pharmaceuticals (Basel, Switzerland) · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Keith M HaynesDepartment of Pharmacological & Physiological Science, Saint Louis University School of Medicine , St Louis, Missouri 63104, United States.
Narges AbdaliDepartment of Chemistry and Biochemistry, University of Oklahoma , Norman, Oklahoma 73019, United States.
Varsha JhawarDepartment of Chemistry and Biochemistry, University of Oklahoma , Norman, Oklahoma 73019, United States.
Helen I ZgurskayaDepartment of Chemistry and Biochemistry, University of Oklahoma , Norman, Oklahoma 73019, United States.
Jerry M ParksUT/ORNL Center for Molecular Biophysics, Biosciences Division, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States.ORCID 0000-0002-3103-9333
Adam T GreenUT/ORNL Center for Molecular Biophysics, Biosciences Division, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States.
Jerome BaudryUT/ORNL Center for Molecular Biophysics, Biosciences Division, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States.
Valentin V RybenkovDepartment of Chemistry and Biochemistry, University of Oklahoma , Norman, Oklahoma 73019, United States.ORCID 0000-0002-5300-4369
Jeremy C SmithUT/ORNL Center for Molecular Biophysics, Biosciences Division, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States.
John K WalkerDepartment of Pharmacological & Physiological Science, Saint Louis University School of Medicine , St Louis, Missouri 63104, United States.ORCID 0000-0002-8683-0026

Funding

Transport across two membranes by AcrAB-TolC complexR01AI052293 · NIAID · UNIVERSITY OF OKLAHOMA NORMAN · PI ZGURSKAYA, HELEN I · 2003 to 2024
$7.7M
Transport Across Two Membranes by AcrAB-TolC ComplexR56AI052293 · NIAID · UNIVERSITY OF OKLAHOMA · PI ZGURSKAYA, HELEN I · 2008 to 2008
$360k
NIAID NIH HHS R01 AI052293NIAID NIH HHS R56 AI052293
6 · The paper itself

Abstract

In Gram-negative bacteria, efflux pumps are able to prevent effective cellular concentrations from being achieved for a number of antibiotics. Small molecule adjuvants that act as efflux pump inhibitors (EPIs) have the potential to reinvigorate existing antibiotics that are currently ineffective due to efflux mechanisms. Through a combination of rigorous experimental screening and in silico virtual screening, we recently identified novel classes of EPIs that interact with the membrane fusion protein AcrA, a critical component of the AcrAB-TolC efflux pump in Escherichia coli. Herein, we present initial optimization efforts and structure-activity relationships around one of those previously described hits, NSC 60339 (1). From these efforts we identified two compounds, SLUPP-225 (17h) and SLUPP-417 (17o), which demonstrate favorable properties as potential EPIs in E. coli cells including the ability to penetrate the outer membrane, improved inhibition of efflux relative to 1, and potentiation of the activity of novobiocin and erythromycin.

Indexed as

Anti-Bacterial AgentsCarrier ProteinsCell Membrane PermeabilityCinnamatesComputer SimulationDatabases, ChemicalDrug Resistance, BacterialDrug SynergismErythromycinEscherichia coliEscherichia coli ProteinsImidazolesLipoproteinsMembrane Transport ProteinsMicrobial Sensitivity TestsModels, MolecularAcrAB-TolC protein, E coliAcrA protein, E coliAnti-Bacterial AgentsCarrier ProteinsCinnamatesErythromycinEscherichia coli ProteinsImidazolesLipoproteinsMembrane Transport ProteinsNovobiocinSLUPP-225SLUPP-417

Identifiers

PMID28650638
PMCPMC5783635

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.