Evidence map›Paper›PMID 28649697›Full record

ArticleAngewandte Chemie (International ed. in English)2017

Bioorthogonal Labeling of Human Prostate Cancer Tissue Slice Cultures for Glycoproteomics.

David R Spiciarich, Rosalie Nolley, Sophia L Maund, Sean C Purcell, Jason Herschel, Anthony T Iavarone, Donna M Peehl, Carolyn R Bertozzi

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Biocompatible Chemistry: A Plug-and-Play Toolbox for Chemical Biology Research.Chembiochem : a European journal of chemical biology · 2025
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Newly synthesized glycoprotein profiling to identify molecular signatures of warm ischemic injury in donor lungs.American journal of physiology. Lung cellular and molecular physiology · 2023
    Article
  8. Article
  9. Click chemistry and drug delivery: A bird's-eye view.Acta pharmaceutica Sinica. B · 2023
    Review
  10. Review
  11. Review
  12. Harnessing the Utility ofFrontiers in oncology · 2022
    Review
  13. Article
  14. Review
  15. Cell membrane-camouflaged liposomes for tumor cell-selective glycans engineering and imaging in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Mass Spectrometry-Based Glycoproteomics and Prostate Cancer.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

David R SpiciarichCollege of Chemistry, University of California, Berkeley, Berkeley, CA, 94720, USA.ORCID 0000-0002-5108-4860
Rosalie NolleyDepartment of Urology, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Sophia L MaundDepartment of Urology, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Sean C PurcellCollege of Chemistry, University of California, Berkeley, Berkeley, CA, 94720, USA.
Jason HerschelDepartment of Mathematics, California State University, East Bay Hayward, CA, 94542, USA.
Anthony T IavaroneQB3/Chemistry Mass Spectrometry Facility, UC Berkeley, Berkeley, CA, 94720, USA.
Donna M PeehlDepartment of Urology, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Carolyn R BertozziDepartment of Chemistry, Stanford University, Stanford, CA, 94305-4401, USA.
Stanford University · USBerkeley College · USCalifornia State University, East Bay · USHoward Hughes Medical Institute · USUniversity of California, Berkeley · US

Funding

Investigating the Surface GlycoproteomeR01CA200423 · NCI · STANFORD UNIVERSITY · PI Carolyn Bertozzi · 2015 to 2026
$3.8M
Drugging the Undruggable Coactivators using Small Molecule InhibitorsR01CA207701 · NCI · BAYLOR COLLEGE OF MEDICINE · PI WANG, JIN · 2017 to 2021
$2.5M
Making glycoproteomics via mass spectrometry more accessible to the greater scientific communityU01CA207702 · NCI · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN, PITTERI, SHARON · 2016 to 2019
$1.9M
High Definition Ion Mobility SpectrometerS10OD020062 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILLIAMS, EVAN R · 2015 to 2015
$590k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA200423NCI NIH HHS R01 CA207701NCI NIH HHS U01 CA207702NIH HHS S10 OD020062
6 · The paper itself

Abstract

Sialylated glycans are found at elevated levels in many types of cancer and have been implicated in disease progression. However, the specific glycoproteins that contribute to the cancer cell-surface sialylation are not well characterized, specifically in bona fide human disease tissue. Metabolic and bioorthogonal labeling methods have previously enabled the enrichment and identification of sialoglycoproteins from cultured cells and model organisms. Herein, we report the first application of this glycoproteomic platform to human tissues cultured ex vivo. Both normal and cancerous prostate tissues were sliced and cultured in the presence of the azide-functionalized sialic acid biosynthetic precursor Ac

Indexed as

AzidesBiotinylationCarbocyaninesHexosaminesHumansIn Vitro TechniquesMaleMass SpectrometryMicroscopy, FluorescencePrincipal Component AnalysisProstatic NeoplasmsProteomicsSialoglycoproteinsVoltage-Dependent Anion Channel 1Alexa Fluor 647AzidesCarbocyaninesHexosaminesN-azidoacetylmannosamineSialoglycoproteinsVDAC1 protein, humanVoltage-Dependent Anion Channel 1bioorthogonal chemistryglycosylationmetabolic incorporationprostate cancerproteomics

Identifiers

PMID28649697
PMCPMC5675001
OpenAlexW2686977585

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.