Evidence map›Paper›PMID 28649236›Full record

ArticleFrontiers in microbiology2017

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National

Chris A Yachison, Catherine Yoshida, James Robertson, John H E Nash, Peter Kruczkiewicz, Eduardo N Taboada, Matthew Walker, Aleisha Reimer, Sara Christianson, Anil Nichani and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 86 citations in OpenAlex.

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  12. Classification ofMicroorganisms · 2021
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  14. Monitoring the Microevolution ofFrontiers in microbiology · 2021
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  15. Rapid Real-Time Polymerase Chain Reaction forFrontiers in microbiology · 2021
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  16. Article
  17. Evaluation ofFrontiers in microbiology · 2021
    Article
  18. Laboratory response checklist for infectious disease outbreaks-preparedness and response considerations for emerging threats.Canada communicable disease report = Releve des maladies transmissibles au Canada · 2020
    Article
  19. Article
  20. Performance and Accuracy of Four Open-Source Tools forApplied and environmental microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Chris A YachisonNational Microbiology Laboratory, Public Health Agency of Canada, WinnipegMB, Canada.
Catherine YoshidaNational Microbiology Laboratory, Public Health Agency of Canada, GuelphON, Canada.
James RobertsonNational Microbiology Laboratory, Public Health Agency of Canada, GuelphON, Canada.
John H E NashNational Microbiology Laboratory, Public Health Agency of Canada, GuelphON, Canada.
Peter KruczkiewiczNational Microbiology Laboratory, Public Health Agency of Canada, LethbridgeAB, Canada.
Eduardo N TaboadaNational Microbiology Laboratory, Public Health Agency of Canada, LethbridgeAB, Canada.
Matthew WalkerNational Microbiology Laboratory, Public Health Agency of Canada, WinnipegMB, Canada.
Aleisha ReimerNational Microbiology Laboratory, Public Health Agency of Canada, WinnipegMB, Canada.
Sara ChristiansonNational Microbiology Laboratory, Public Health Agency of Canada, WinnipegMB, Canada.
Anil NichaniNational Microbiology Laboratory, Public Health Agency of Canada, GuelphON, Canada.
PulseNet Canada Steering Committee
Celine NadonNational Microbiology Laboratory, Public Health Agency of Canada, WinnipegMB, Canada.
Public Health Agency of Canada · CAUniversity of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

phenotype predictionSalmonella entericaserotypingserovarssurveillancewhole genome sequencing

Identifiers

PMID28649236
PMCPMC5465390
OpenAlexW2726286722

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.