Evidence map›Paper›PMID 28648843›Full record

ArticleDevelopmental biology2017

Identification of regulators of germ stem cell enwrapment by its niche in C. elegans.

Lara M Linden, Kacy L Gordon, Ariel M Pani, Sara G Payne, Aastha Garde, Dane Burkholder, Qiuyi Chi, Bob Goldstein, David R Sherwood

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  5. Journal of biosciences · 2025
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  18. Biology of theGenetics · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lara M LindenDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Kacy L GordonDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Ariel M PaniDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Sara G PayneDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Aastha GardeDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Dane BurkholderDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Qiuyi ChiDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA.
Bob GoldsteinDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
David R SherwoodDepartment of Biology, Regeneration Next, Duke University, Durham, NC 27708, USA. Electronic address: david.sherwood@duke.edu.
Duke University · USUniversity of North Carolina at Chapel Hill · US

Funding

Training Program in Developmental & Stem Cell BiologyT32HD040372 · NICHD · DUKE UNIVERSITY · PI Terry H Lechler · 2001 to 2026
$8.9M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Understanding how cells invade through basement membrane in vivoR35GM118049 · NIGMS · DUKE UNIVERSITY · PI David R Sherwood · 2016 to 2026
$6.8M
Mechanisms of C. elegans GastrulationR01GM083071 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GOLDSTEIN, ROBERT P · 2008 to 2019
$3.7M
Genetic Analysis of Cell Invasion through Basement MembranesR01GM079320 · NIGMS · DUKE UNIVERSITY · PI SHERWOOD, DAVID R · 2007 to 2015
$2.8M
Understanding how innexins direct stem cell niche morphologyF32GM121015 · NIGMS · DUKE UNIVERSITY · PI GORDON, KACY LYNN · 2016 to 2018
$116k
Deciphering Roles of Cell Shapes in SignalingF32GM115151 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PANI, ARIEL MATTHEW · 2015 to 2015
$52k
NICHD NIH HHS T32 HD040372NIGMS NIH HHS F32 GM115151NIGMS NIH HHS F32 GM121015NIGMS NIH HHS R01 GM079320NIGMS NIH HHS R01 GM083071NIGMS NIH HHS R35 GM118049NIH HHS P40 OD010440
6 · The paper itself

Abstract

Many stem cell niches contain support cells that increase contact with stem cells by enwrapping them in cellular processes. One example is the germ stem cell niche in C. elegans, which is composed of a single niche cell termed the distal tip cell (DTC) that extends cellular processes, constructing an elaborate plexus that enwraps germ stem cells. To identify genes required for plexus formation and to explore the function of this specialized enwrapping behavior, a series of targeted and tissue-specific RNAi screens were performed. Here we identify genes that promote stem cell enwrapment by the DTC plexus, including a set that specifically functions within the DTC, such as the chromatin modifier lin-40/MTA1, and others that act within the germline, such as the 14-3-3 signaling protein par-5. Analysis of genes that function within the germline to mediate plexus development reveal that they are required for expansion of the germ progenitor zone, supporting the emerging idea that germ stem cells signal to the niche to stimulate enwrapping behavior. Examination of wild-type animals with asymmetric plexus formation and animals with reduced DTC plexus elaboration via loss of two candidates including lin-40 indicate that cellular enwrapment promotes GLP-1/Notch signaling and germ stem cell fate. Together, our work identifies novel regulators of cellular enwrapment and suggests that reciprocal signaling between the DTC niche and the germ stem cells promotes enwrapment behavior and stem cell fate.

Indexed as

Stem Cell NicheAnimalsCaenorhabditis elegansCell LineageEmbryo, NonmammalianGenes, HelminthGenes, ReporterGerm CellsRNA InterferenceStem CellsTransgenesDistal tip cellGerm cellNicheSomatic gonadStem cell

Identifiers

PMID28648843
PMCPMC5560089
OpenAlexW2679593615

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.