Evidence map›Paper›PMID 28648452›Full record

ReviewTrends in genetics : TIG2017

Advances in Decoding Axolotl Limb Regeneration.

Brian J Haas, Jessica L Whited

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

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  14. The salamander blastema within the broader context of metazoan regeneration.Frontiers in cell and developmental biology · 2023
    Review
  15. Establishing a New Research Axolotl Colony.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  16. Article
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  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Brian J HaasBroad Institute of Massachusetts Institute of Technology(MIT) and Harvard, Klarman Cell Observatory, 415 Main Street, Cambridge, MA 02142, USA. Electronic address: bhaas@broadinstitute.org.
Jessica L WhitedHarvard Medical School, Harvard Stem Cell Institute, and Brigham and Women's Hospital Department of Orthopedic Surgery, 60 Fenwood Road, Boston, MA 02115, USA. Electronic address: jwhited@bwh.harvard.edu.

Funding

Trinity: Transcriptome assembly for genetic and functional analysis of cancerU24CA180922 · NCI · BROAD INSTITUTE, INC. · PI HAAS, BRIAN · 2013 to 2022
$7.5M
Leveraging Single-Cell Analysis to Elucidate Mechanisms of Vertebrate LimbRegenerationDP2HD087953 · NICHD · HARVARD UNIVERSITY · PI WHITED, JESSICA L. · 2015 to 2020
$3.2M
Open Software and Resource Development Leveraging Next-gen Sequencing Data to Facilitate Computational Analysis of Cancer BiologyR50CA211461 · NCI · BROAD INSTITUTE, INC. · PI HAAS, BRIAN · 2016 to 2020
$1.7M
EPIDERMAL FACTORS THAT PROMOTE INTERNAL TISSUE PROGENITOR ACTIVATION FOLLOWING AMPUTATIONR03AR068126 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI WHITED, JESSICA L. · 2015 to 2017
$266k
Elucidating a Role for Blastema-Enriched Genes in Salamander Limb Regeneration,R03HD083434 · NICHD · BRIGHAM AND WOMEN'S HOSPITAL · PI WHITED, JESSICA L. · 2015 to 2016
$176k
NCI NIH HHS R50 CA211461NCI NIH HHS U24 CA180922NIAMS NIH HHS R03 AR068126NICHD NIH HHS DP2 HD087953NICHD NIH HHS R03 HD083434
6 · The paper itself

Abstract

Humans and other mammals are limited in their natural abilities to regenerate lost body parts. By contrast, many salamanders are highly regenerative and can spontaneously replace lost limbs even as adults. Because salamander limbs are anatomically similar to human limbs, knowing how they regenerate should provide important clues for regenerative medicine. Although interest in understanding the mechanics of this process has never wavered, until recently researchers have been vexed by seemingly impenetrable logistics of working with these creatures at a molecular level. Chief among the problems has been the very large size of salamander genomes, and not a single salamander genome has been fully sequenced to date. Recently the enormous gap in sequence information has been bridged by approaches that leverage mRNA as the starting point. Together with functional experimentation, these data are rapidly enabling researchers to finally uncover the molecular mechanisms underpinning the astonishing biological process of limb regeneration.

Indexed as

Ambystoma mexicanumAnimalsExtremitiesGenomeRegenerationRNA, MessengerRNA, Messenger

Identifiers

PMID28648452
PMCPMC5534018

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.