Evidence map›Paper›PMID 28648140›Full record

ArticleXenobiotica; the fate of foreign compounds in biological systems2018

Oxidation of 1-chloropyrene by human CYP1 family and CYP2A subfamily cytochrome P450 enzymes: catalytic roles of two CYP1B1 and five CYP2A13 allelic variants.

Tsutomu Shimada, Norie Murayama, Kensaku Kakimoto, Shigeo Takenaka, Young-Ran Lim, Sora Yeom, Donghak Kim, Hiroshi Yamazaki, F Peter Guengerich, Masayuki Komori

Open access · greenAbstract read
In one paragraph

Article in Xenobiotica; the fate of foreign compounds in biological systems, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. CYP1B1- and CYP1A1-Template systems and their application to metabolism and inhibition.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2025
    Article
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  6. Preference forXenobiotica; the fate of foreign compounds in biological systems · 2020
    Article
  7. Site-specific oxidation of flavanone and flavone by cytochrome P450 2A6 in human liver microsomes.Xenobiotica; the fate of foreign compounds in biological systems · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Tsutomu Shimadaa Laboratory of Cellular and Molecular Biology, Osaka Prefecture University , Osaka , Japan.
Norie Murayamab Laboratory of Drug Metabolism and Pharmacokinetics, Showa Pharmaceutical University , Machida , Tokyo.
Kensaku Kakimotoc Osaka Institute of Public Health , Osaka , Japan.
Shigeo Takenakad Graduate School of Comprehensive Rehabilitation, Osaka Prefecture University , Osaka , Japan.
Young-Ran Lime Department of Biological Sciences , Konkuk University , Seoul , Korea , and.
Sora Yeome Department of Biological Sciences , Konkuk University , Seoul , Korea , and.
Donghak Kime Department of Biological Sciences , Konkuk University , Seoul , Korea , and.
Hiroshi Yamazakib Laboratory of Drug Metabolism and Pharmacokinetics, Showa Pharmaceutical University , Machida , Tokyo.
F Peter Guengerichf Department of Biochemistry , Vanderbilt University School of Medicine , Nashville, TN , USA.
Masayuki Komoria Laboratory of Cellular and Molecular Biology, Osaka Prefecture University , Osaka , Japan.
Konkuk University · KROsaka Prefecture University · JPShowa Pharmaceutical University · JPOsaka Prefectural Institute of Public Health · JPVanderbilt University · US

Funding

Metabolism of Carcinogens and Drugs by Human P450sR01GM118122 · NIGMS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 2016 to 2023
$3.3M
NIGMS NIH HHS R01 GM118122
6 · The paper itself

Abstract

1. 1-Chloropyrene, one of the major chlorinated polycyclic aromatic hydrocarbon contaminants, was incubated with human cytochrome P450 (P450 or CYP) enzymes including CYP1A1, 1A2, 1B1, 2A6, 2A13, 2B6, 2C9, 2D6, 2E1, 3A4 and 3A5. Catalytic differences in 1-chloropyrene oxidation by polymorphic two CYP1B1 and five CYP2A13 allelic variants were also examined. 2. CYP1A1 oxidized 1-chloropyrene at the 6- and 8-positions more actively than at the 3-position, while both CYP1B1.1 and 1B1.3 preferentially catalyzed 6-hydroxylation. 3. Five CYP2A13 allelic variants oxidized 8-hydroxylation much more than 6- and 3-hydroxylation, and the variant CYP2A13.3 was found to slowly catalyze these reactions with a lower k

Indexed as

AllelesAryl Hydrocarbon HydroxylasesCytochrome P-450 CYP1B1Molecular Docking SimulationBiocatalysisHumansOxidation-ReductionPyrenes1-chloropyreneAryl Hydrocarbon HydroxylasesCYP1B1 protein, humanCYP2A13 protein, humanCytochrome P-450 CYP1B1Pyrenes1-chloropyrenedockingP450 1B1P450 2A13P450 2A6

Identifiers

PMID28648140
PMCPMC5780263
OpenAlexW2680421068

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.