Evidence map›Paper›PMID 28647055›Full record

ReviewTrends in genetics : TIG2017

Uncovering Gene Regulatory Networks Controlling Plant Cell Differentiation.

Colleen Drapek, Erin E Sparks, Philip N Benfey

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
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  17. Recurrent requirement for the mDevelopment (Cambridge, England) · 2020
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Colleen DrapekDuke University, Durham, NC 27708, USA.
Erin E SparksDuke University, Durham, NC 27708, USA.
Philip N BenfeyDuke University, Durham, NC 27708, USA; Howard Hughes Medical Institute, Duke University, Durham, NC 27708, USA. Electronic address: philip.benfey@duke.edu.

Funding

Training Program in Developmental & Stem Cell BiologyT32HD040372 · NICHD · DUKE UNIVERSITY · PI Terry H Lechler · 2001 to 2026
$8.9M
MOLECULAR GENETIC ANALYSIS OF ROOT MORPHOGENESISR01GM043778 · NIGMS · ROCKEFELLER UNIVERSITY · PI BENFEY, PHILIP N · 1991 to 2017
$5.4M
Data commons for 'omic, microscopy and analysis core facilitiesS10OD018164 · OD · DUKE UNIVERSITY · PI WRAY, GREGORY A. · 2014 to 2014
$598k
Howard Hughes Medical InstituteNICHD NIH HHS T32 HD040372NIGMS NIH HHS R01 GM043778NIH HHS S10 OD018164
6 · The paper itself

Abstract

The development of multicellular organisms relies on the precise regulation of cellular differentiation. As such, there has been significant effort invested to understand the process through which an immature cell undergoes differentiation. In this review, we highlight key discoveries and advances that have contributed to our understanding of the transcriptional networks underlying Arabidopsis root endodermal differentiation. To conclude, we propose perspectives on how advances in molecular biology, microscopy, and nucleotide sequencing will provide the tools to test the biological significance of these gene regulatory networks (GRN).

Indexed as

Gene Regulatory NetworksArabidopsisCell DifferentiationGene Expression Regulation, PlantPlant RootsTranscription, GeneticArabidopsis rootcell differentiationendodermis

Identifiers

PMID28647055
PMCPMC5522350

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.