Evidence map›Paper›PMID 28644879›Full record

ArticlePloS one2017

Identification of a novel fungus, Trichoderma asperellum GDFS1009, and comprehensive evaluation of its biocontrol efficacy.

Qiong Wu, Ruiyan Sun, Mi Ni, Jia Yu, Yaqian Li, Chuanjin Yu, Kai Dou, Jianhong Ren, Jie Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
25.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 158 citations in OpenAlex.

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  5. Enhanced activity ofHeliyon · 2024
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  6. Review
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  10. UsingJournal of fungi (Basel, Switzerland) · 2023
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  11. Biocontrol Potential ofJournal of fungi (Basel, Switzerland) · 2023
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  12. Control Effect and Mechanism ofPolish journal of microbiology · 2023
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  13. Baseline Analysis of Endophytic Fungal Associates ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  14. Article
  15. Plants (Basel, Switzerland) · 2023
    Review
  16. Article
  17. Frontiers in microbiology · 2023
    Article
  18. Biological management of coffee wilt disease (Frontiers in plant science · 2023
    Article
  19. Article
  20. Effects ofJournal of fungi (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Qiong WuDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Ruiyan SunDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Mi NiState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Jia YuDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Yaqian LiDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Chuanjin YuDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Kai DouDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Jianhong RenSuzhou BioNovoGene Metabolomics Platform, Suzhou, China.
Jie ChenDepartment of Environment and Resource, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Shanghai Jiao Tong University · CNShanghai Veterinary Research Institute · CNChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to its efficient broad-spectrum antimicrobial activity, Trichoderma has been established as an internationally recognized biocontrol fungus. In this study, we found and identified a novel strain of Trichoderma asperellum, named GDFS1009. The mycelium of T. asperellum GDFS1009 exhibits a high growth rate, high sporulation capacity, and strong inhibitory effects against pathogens that cause cucumber fusarium wilt and corn stalk rot. T. asperellum GDFS1009 secretes chitinase, glucanase, and protease, which can degrade the cell walls of fungi and contribute to mycoparasitism. The secreted xylanases are good candidates for inducing plant resistance and enhancing plant immunity against pathogens. RNA sequencing (RNA-seq) and gas chromatography-mass spectrometry (GC-MS) showed that T. asperellum GDFS1009 produces primary metabolites that are precursors of antimicrobial compounds; it also produces a variety of antimicrobial secondary metabolites, including polyketides and alkanes. In addition, this study speculated the presence of six antimicrobial peptides via ultra-performance liquid chromatography quadrupole time of flight mass spectrometry (UPLC-QTOF-MS/MS). Future studies should focus on these antimicrobial metabolites for facilitating widespread application in the field of agricultural bio-control.

Indexed as

Biological Control AgentsAlkanesAntibiosisAnti-Infective AgentsChromatography, LiquidCluster AnalysisCucumis sativusFungal ProteinsFusariumGas Chromatography-Mass SpectrometryGene ExpressionNicotianaPhylogenyPlant DiseasesPolyketidesSecondary MetabolismAlkanesAnti-Infective AgentsBiological Control AgentsFungal ProteinsPolyketides

Identifiers

PMID28644879
PMCPMC5482467
OpenAlexW2659777735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.