Evidence map›Paper›PMID 28644434›Full record

ArticleCell death and differentiation2017

Ageing and hypoxia cause protein aggregation in mitochondria.

Daniel M Kaufman, Xia Wu, Barbara A Scott, Omar A Itani, Marc R Van Gilst, James E Bruce, C Michael Crowder

Abstract read
In one paragraph

Article in Cell death and differentiation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Raptor and Drp1 Function Synthetically to Control Hypoxic Death and the Mitochondrial Network in Caenorhabditis elegans.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  2. Article
  3. Review
  4. Review
  5. Frontiers in aging neuroscience · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Mitochondrial dysfunction, UPRCell & bioscience · 2021
    Review
  14. Protein Aggregation in the Pathogenesis of Ischemic Stroke.Cellular and molecular neurobiology · 2021
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Daniel M KaufmanDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA 98195, USA.
Xia WuDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID 0000-0002-0024-4481
Barbara A ScottDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA 98195, USA.
Omar A ItaniDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA 98195, USA.
Marc R Van GilstDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA 98195, USA.
James E BruceDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
C Michael CrowderDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA 98195, USA.

Funding

NATIONAL RESEARCH SERVICE AWARD-MEDICAL SCIENTISTT32GM007200 · NIGMS · WASHINGTON UNIVERSITY · PI YOKOYAMA, WAYNE M. · 1985 to 2024
$59.8M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
GENETIC ANALYSIS OF HYPOXIC DEATH IN C ELEGANSR01NS045905 · NINDS · WASHINGTON UNIVERSITY · PI CROWDER, C. MICHAEL · 2004 to 2016
$4.4M
Quantitation of protein interactions in cancer cellsR01GM086688 · NIGMS · UNIVERSITY OF WASHINGTON · PI BRUCE, JAMES EDWARD · 2009 to 2019
$4.2M
Investigating treatment resistance mechanisms in chronic bacterial infectionsR01AI101307 · NIAID · UNIVERSITY OF WASHINGTON · PI BRUCE, JAMES EDWARD, MANOIL, COLIN · 2012 to 2016
$2.9M
Mitochondrial Protein Misfolding and Aggregation after Hypoxia: Mechanisms and MitigationR01NS100350 · NINDS · UNIVERSITY OF WASHINGTON · PI CROWDER, C. MICHAEL · 2017 to 2021
$2.6M
A C. ELEGANS MODEL FOR NMNAT1-MEDIATED HYPOXIC PROTECTION AND LIFESPAN EXTENSIONR21NS084360 · NINDS · WASHINGTON UNIVERSITY · PI CROWDER, C. MICHAEL · 2013 to 2014
$443k
NIAID NIH HHS R01 AI101307NIGMS NIH HHS R01 GM086688NIGMS NIH HHS T32 GM007200NIH HHS P40 OD010440NINDS NIH HHS R01 NS045905NINDS NIH HHS R01 NS100350NINDS NIH HHS R21 NS084360
6 · The paper itself

Abstract

Aggregation of cytosolic proteins is a pathological finding in disease states, including ageing and neurodegenerative diseases. We have previously reported that hypoxia induces protein misfolding in Caenorhabditis elegans mitochondria, and electron micrographs suggested protein aggregates. Here, we seek to determine whether mitochondrial proteins actually aggregate after hypoxia and other cellular stresses. To enrich for mitochondrial proteins that might aggregate, we performed a proteomics analysis on purified C. elegans mitochondria to identify relatively insoluble proteins under normal conditions (110 proteins identified) or after sublethal hypoxia (65 proteins). A GFP-tagged mitochondrial protein (UCR-11 - a complex III electron transport chain protein) in the normally insoluble set was found to form widespread aggregates in mitochondria after hypoxia. Five other GFP-tagged mitochondrial proteins in the normally insoluble set similarly form hypoxia-induced aggregates. Two GFP-tagged mitochondrial proteins from the soluble set as well as a mitochondrial-targeted GFP did not form aggregates. Ageing also resulted in aggregates. The number of hypoxia-induced aggregates was regulated by the mitochondrial unfolded protein response (UPRmt) master transcriptional regulator ATFS-1, which has been shown to be hypoxia protective. An atfs-1(loss-of-function) mutant and RNAi construct reduced the number of aggregates while an atfs-1(gain-of-function) mutant increased aggregates. Our work demonstrates that mitochondrial protein aggregation occurs with hypoxic injury and ageing in C. elegans. The UPRmt regulates aggregation and may protect from hypoxia by promoting aggregation of misfolded proteins.

Indexed as

AgingAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsMitochondriaMitochondrial ProteinsNeurodegenerative DiseasesOxygenTranscription FactorsUnfolded Protein ResponseCaenorhabditis elegans ProteinsMitochondrial ProteinsOxygenTranscription Factors

Identifiers

PMID28644434
PMCPMC5596417

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.