Evidence map›Paper›PMID 28642594›Full record

ArticleLeukemia2018

Differential effects on gene transcription and hematopoietic differentiation correlate with GATA2 mutant disease phenotypes.

C-E Chong, P Venugopal, P H Stokes, Y K Lee, P J Brautigan, D T O Yeung, M Babic, G A Engler, S W Lane, M Klingler-Hoffmann and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  4. Review
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  8. PML::RARA and GATA2 proteins interact via DNA templates to induce aberrant self-renewal in mouse and human hematopoietic cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Pathogenic GATA2 genetic variants utilize an obligate enhancer mechanism to distort a multilineage differentiation program.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Biomolecules & biomedicine · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. GermlineHaematologica · 2022
    Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

C-E ChongDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
P VenugopalDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
P H StokesSchool of Molecular Bioscience, University of Sydney, Sydney, New South Wales, Australia.
Y K LeeDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
P J BrautiganDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
D T O YeungDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
M BabicDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
G A EnglerDivision of Hematology, SA Pathology, Adelaide, South Australia, Australia.
S W LaneQIMR Berghofer Medical Research Institute and University of Queensland, Brisbane, Queensland, Australia.
M Klingler-HoffmannSchool of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
J M MatthewsSchool of Molecular Bioscience, University of Sydney, Sydney, New South Wales, Australia.
R J D'AndreaCentre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.
A L BrownDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
C N HahnDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
H S ScottDepartment of Genetics and Molecular Pathology, SA Pathology and University of South Australia Alliance, Adelaide, South Australia, Australia.
South Australia Pathology · AUUniversity of Adelaide · AUUniversity of South Australia · AUUniversity of Sydney · AUCentre for Cancer Biology · AUUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heterozygous GATA2 mutations underlie an array of complex hematopoietic and lymphatic diseases. Analysis of the literature reporting three recurrent GATA2 germline (g) mutations (gT354M, gR396Q and gR398W) revealed different phenotype tendencies. Although all three mutants differentially predispose to myeloid malignancies, there was no difference in leukemia-free survival for GATA2 patients. Despite intense interest, the molecular pathogenesis of GATA2 mutation is poorly understood. We functionally characterized a GATA2 mutant allelic series representing major disease phenotypes caused by germline and somatic (s) mutations in zinc finger 2 (ZF2). All GATA2 mutants, except for sL359V, displayed reduced DNA-binding affinity and transactivation compared with wild type (WT), which could be attributed to mutations of arginines critical for DNA binding or amino acids required for ZF2 domain structural integrity. Two GATA2 mutants (gT354M and gC373R) bound the key hematopoietic differentiation factor PU.1 more strongly than WT potentially perturbing differentiation via sequestration of PU.1. Unlike WT, all mutants failed to suppress colony formation and some mutants skewed cell fate to granulocytes, consistent with the monocytopenia phenotype seen in GATA2-related immunodeficiency disorders. These findings implicate perturbations of GATA2 function shaping the course of development of myeloid malignancy subtypes and strengthen complete or nearly complete haploinsufficiency for predisposition to lymphedema.

Indexed as

AnimalsCell DifferentiationChlorocebus aethiopsCOS CellsFemaleGATA2 Transcription FactorGenetic Predisposition to DiseaseGenotypeHaploinsufficiencyHEK293 CellsHematopoietic SystemHumansMaleMiceMice, Inbred C57BLMutationGATA2 protein, humanGATA2 Transcription Factor

Identifiers

PMID28642594
PMCPMC5770593
OpenAlexW2694592603

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.