Evidence map›Paper›PMID 28642461›Full record

ArticleScientific reports2017

The CA19-9 and Sialyl-TRA Antigens Define Separate Subpopulations of Pancreatic Cancer Cells.

Daniel Barnett, Ying Liu, Katie Partyka, Ying Huang, Huiyuan Tang, Galen Hostetter, Randall E Brand, Aatur D Singhi, Richard R Drake, Brian B Haab

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Selective ablation of TRA-1-60Theranostics · 2023
    Article
  7. Review
  8. Review
  9. Article
  10. Detection of Chemotherapy-resistant Pancreatic Cancer Using a Glycan Biomarker, sTRA.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Observational
  11. Review
  12. Biomarkers and Strategy to Detect Preinvasive and Early Pancreatic Cancer: State of the Field and the Impact of the EDRN.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. The sTRA Plasma Biomarker: Blinded Validation of Improved Accuracy Over CA19-9 in Pancreatic Cancer Diagnosis.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Daniel BarnettVan Andel Research Institute, Grand Rapids, MI, USA.
Ying LiuVan Andel Research Institute, Grand Rapids, MI, USA.
Katie PartykaVan Andel Research Institute, Grand Rapids, MI, USA.
Ying HuangFred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-9655-7502
Huiyuan TangVan Andel Research Institute, Grand Rapids, MI, USA.
Galen HostetterVan Andel Research Institute, Grand Rapids, MI, USA.
Randall E BrandUniversity of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Aatur D SinghiUniversity of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Richard R DrakeMedical University of South Carolina, Charleston, SC, USA.
Brian B HaabVan Andel Research Institute, Grand Rapids, MI, USA. brian.haab@vai.org.
Van Andel Institute · USUniversity of Pittsburgh Medical Center · USFred Hutch Cancer Center · USMedical University of South Carolina · US

Funding

The Early Detection Research Network: Data Management and Coordinating CenterU24CA086368 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI RUTH D ETZIONI, Ziding Feng · 2010 to 2026
$75.7M
Translational Science Laboratory Shared ResourceP30CA138313 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI RAYMOND N. DUBOIS · 2009 to 2026
$42.7M
Detection of Pre-Invasive Pancreatic Cysts Using Protein and Glycan BiomarkersU01CA152653 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI ALLEN, PETER J, BRAND, RANDALL · 2010 to 2021
$5.8M
Targeted Glycomics and Affinity Reagents for Cancer Biomarker DevelopmentU01CA168896 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI HAAB, BRIAN B. · 2012 to 2016
$2.3M
Comprehensive Glycoproteomic Tool Development for Cancer BiomarkersR41GM112750 · NIGMS · PROTEIN METRICS, LLC · PI BECKER, CHRISTOPHER H, HAAB, BRIAN B. · 2014 to 2015
$686k
On-chip Glycan Analysis of Clinical SpecimensR21AI129872 · NIAID · VAN ANDEL RESEARCH INSTITUTE · PI HAAB, BRIAN B. · 2016 to 2017
$631k
Detection and Histopathology Localization of O-Glycans and Glycosaminoglycans in TissuesR21CA207779 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DRAKE, RICHARD R. · 2016 to 2017
$547k
Direct Tumor Glycan Profiling on Tissue MicroarraysR21CA186799 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DRAKE, RICHARD R. · 2015 to 2016
$496k
NCI NIH HHS P30 CA138313NCI NIH HHS R21 CA186799NCI NIH HHS R21 CA207779NCI NIH HHS U01 CA152653NCI NIH HHS U01 CA168896NCI NIH HHS U24 CA086368NIAID NIH HHS R21 AI129872NIGMS NIH HHS R41 GM112750
6 · The paper itself

Abstract

Molecular markers to detect subtypes of cancer cells could facilitate more effective treatment. We recently identified a carbohydrate antigen, named sTRA, that is as accurate a serological biomarker of pancreatic cancer as the cancer antigen CA19-9. We hypothesized that the cancer cells producing sTRA are a different subpopulation than those producing CA19-9. The sTRA glycan was significantly elevated in tumor tissue relative to adjacent pancreatic tissue in 3 separate tissue microarrays covering 38 patients. The morphologies of the cancer cells varied in association with glycan expression. Cells with dual staining of both markers tended to be in well-to-moderately differentiated glands with nuclear polarization, but exclusive sTRA staining was present in small clusters of cells with poor differentiation and large vacuoles, or in small and ill-defined glands. Patients with higher dual-staining of CA19-9 and sTRA had statistically longer time-to-progression after surgery. Patients with short time-to-progression (<2 years) had either low levels of the dual-stained cells or high levels of single-stained cells, and such patterns differentiated short from long time-to-progression with 90% (27/30) sensitivity and 80% (12/15) specificity. The sTRA and CA19-9 glycans define separate subpopulations of cancer cells and could together have value for classifying subtypes of pancreatic adenocarcinoma.

Indexed as

Antigens, NeoplasmBiomarkers, TumorAnimalsAntigens, Tumor-Associated, CarbohydrateCell Line, TumorDisease Models, AnimalDisease ProgressionEnzyme-Linked Immunosorbent AssayHeterograftsHumansImmunohistochemistryMiceNeoplasm GradingPancreatic NeoplasmsPolysaccharidesPrognosisAntigens, NeoplasmAntigens, Tumor-Associated, CarbohydrateBiomarkers, Tumorcarbohydrate antigen 199, humanPolysaccharides

Identifiers

PMID28642461
PMCPMC5481434
OpenAlexW2625523943

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.