Evidence map›Paper›PMID 28642365›Full record

ArticleG3 (Bethesda, Md.)2017

Phenotypic Diagnosis of Lineage and Differentiation During Sake Yeast Breeding.

Shinsuke Ohnuki, Hiroki Okada, Anne Friedrich, Yoichiro Kanno, Tetsuya Goshima, Hirokazu Hasuda, Masaaki Inahashi, Naoto Okazaki, Hiroyasu Tamura, Ryo Nakamura and 8 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Systematic data analysis pipeline for quantitative morphological cell phenotyping.Computational and structural biotechnology journal · 2024
    Review
  5. Article
  6. Improved 2,3-Butanediol Production Rate of Metabolically EngineeredInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. The microbiome of Chinese rice wine (Huangjiu).Current research in food science · 2022
    Review
  9. Article
  10. Article
  11. Nutrient Signaling via the TORC1-Greatwall-PP2AApplied and environmental microbiology · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Shinsuke OhnukiDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, 277-8562, Japan.ORCID 0000-0001-6254-081X
Hiroki OkadaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, 277-8562, Japan.
Anne FriedrichDepartment of Genetics, Genomics and Microbiology, University of Strasbourg, Centre National de la Recherche Scientifique, 67083, France.
Yoichiro KannoBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan.
Tetsuya GoshimaBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan.
Hirokazu HasudaBrewing Society of Japan, Kita-ku, 114-0023, Japan.
Masaaki InahashiBrewing Society of Japan, Kita-ku, 114-0023, Japan.
Naoto OkazakiBrewing Society of Japan, Kita-ku, 114-0023, Japan.
Hiroyasu TamuraResearch and Development Department, Asahi Sake Brewing Co., Ltd., Nagaoka, 949-5494, Japan.
Ryo NakamuraResearch and Development Department, Asahi Sake Brewing Co., Ltd., Nagaoka, 949-5494, Japan.
Dai HirataResearch and Development Department, Asahi Sake Brewing Co., Ltd., Nagaoka, 949-5494, Japan.
Hisashi FukudaBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan.
Hitoshi ShimoiBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan.
Katsuhiko KitamotoPharmaceutical Medical Business Sciences, Nihon Pharmaceutical University, Bunkyo-ku, 113-0034, Japan.
Daisuke WatanabeBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan.
Joseph SchachererDepartment of Genetics, Genomics and Microbiology, University of Strasbourg, Centre National de la Recherche Scientifique, 67083, France.
Takeshi AkaoBrewing Microbiology Division, National Research Institute of Brewing, Higashi-Hiroshima, 739-0046, Japan akao_t@nrib.go.jp ohya@k.u-tokyo.ac.jp.ORCID 0000-0003-2784-2016
Yoshikazu OhyaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, 277-8562, Japan akao_t@nrib.go.jp ohya@k.u-tokyo.ac.jp.ORCID 0000-0003-0837-1239

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sake yeast was developed exclusively in Japan. Its diversification during breeding remains largely uncharacterized. To evaluate the breeding processes of the sake lineage, we thoroughly investigated the phenotypes and differentiation of 27 sake yeast strains using high-dimensional, single-cell, morphological phenotyping. Although the genetic diversity of the sake yeast lineage is relatively low, its morphological diversity has expanded substantially compared to that of the

Indexed as

Cell DifferentiationCell LineageBreedingGeographyMutationPhenotypeQuantitative Trait, HeritableSaccharomyces cerevisiaecell morphologyphenotypic diversitysake yeastsingle-cell phenotyping

Identifiers

PMID28642365
PMCPMC5555484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.