Evidence map›Paper›PMID 28642272›Full record

ArticleGenetics2017

Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping.

Yuelong Guo, Sylwia Fudali, Jacinta Gimeno, Peter DiGennaro, Stella Chang, Valerie M Williamson, David McK Bird, Dahlia M Nielsen

Abstract read
In one paragraph

Article in Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuelong GuoBioinformatics Research Center, North Carolina State University, Raleigh, North Carolina 27695.
Sylwia FudaliDepartment of Plant Pathology, University of California, Davis, California 95616.
Jacinta GimenoDepartment of Plant Pathology, University of California, Davis, California 95616.
Peter DiGennaroDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695.
Stella ChangDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695.
Valerie M WilliamsonDepartment of Plant Pathology, University of California, Davis, California 95616.
David McK BirdDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695 david_bird@ncsu.edu dahlia@statgen.ncsu.edu.
Dahlia M NielsenBioinformatics Research Center, North Carolina State University, Raleigh, North Carolina 27695 david_bird@ncsu.edu dahlia@statgen.ncsu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Organisms engage in extensive cross-species molecular dialog, yet the underlying molecular actors are known for only a few interactions. Many techniques have been designed to uncover genes involved in signaling between organisms. Typically, these focus on only one of the partners. We developed an expression quantitative trait locus (eQTL) mapping-based approach to identify cause-and-effect relationships between genes from two partners engaged in an interspecific interaction. We demonstrated the approach by assaying expression of 98 isogenic plants (

Indexed as

Gene Regulatory NetworksQuantitative Trait LociAnimalsChromosome MappingGenetic PleiotropyHelminth ProteinsMedicagoPlant ProteinsPolymorphism, GeneticSymbiosisTranscription FactorsTylenchoideaHelminth ProteinsPlant ProteinsTranscription Factorshost–pathogen interactionRNA-Seqsymbiosistrans-eQTLtransspecies

Identifiers

PMID28642272
PMCPMC5560814

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.