Evidence map›Paper›PMID 28638387›Full record

ArticleFrontiers in plant science2017

Predicting Flowering Behavior and Exploring Its Genetic Determinism in an Apple Multi-family Population Based on Statistical Indices and Simplified Phenotyping.

Jean-Baptiste Durand, Alix Allard, Baptiste Guitton, Eric van de Weg, Marco C A M Bink, Evelyne Costes

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Identifying Developmental Patterns in Structured Plant Phenotyping Data.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  3. Article
  4. FaRCa1: a major subgenome-specific locus conferring resistance to Colletotrichum acutatum in strawberry.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jean-Baptiste DurandLaboratoire Jean Kuntzmann, Inria Mistis, Université Grenoble AlpesGrenoble, France.
Alix AllardEquipe Architecture et Fonctionnement des Espèces Fruitières, UMR AGAP, Institut National de la Recherche AgronomiqueMontpellier, France.
Baptiste GuittonEquipe Architecture et Fonctionnement des Espèces Fruitières, UMR AGAP, Institut National de la Recherche AgronomiqueMontpellier, France.
Eric van de WegWageningen UR Plant Breeding, Wageningen University and ResearchWageningen, Netherlands.
Marco C A M BinkBiometris, Wageningen University and ResearchWageningen, Netherlands.
Evelyne CostesEquipe Architecture et Fonctionnement des Espèces Fruitières, UMR AGAP, Institut National de la Recherche AgronomiqueMontpellier, France.
Agropolis International · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRLaboratoire National de Métrologie et d'Essais · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Irregular flowering over years is commonly observed in fruit trees. The early prediction of tree behavior is highly desirable in breeding programmes. This study aims at performing such predictions, combining simplified phenotyping and statistics methods. Sequences of vegetative vs. floral annual shoots (AS) were observed along axes in trees belonging to five apple related full-sib families. Sequences were analyzed using Markovian and linear mixed models including year and site effects. Indices of flowering irregularity, periodicity and synchronicity were estimated, at tree and axis scales. They were used to predict tree behavior and detect QTL with a Bayesian pedigree-based analysis, using an integrated genetic map containing 6,849 SNPs. The combination of a Biennial Bearing Index (BBI) with an autoregressive coefficient (γ

Indexed as

bayes factorbiennial bearingentropyMalus × domesticamarkov modelspedigree based analysis

Identifiers

PMID28638387
PMCPMC5461300
OpenAlexW2621950413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.