Evidence map›Paper›PMID 28637869›Full record

ArticleThe Journal of biological chemistry2017

Heat shock proteins stimulate APOBEC-3-mediated cytidine deamination in the hepatitis B virus.

Zhigang Chen, Thomas L Eggerman, Alexander V Bocharov, Irina N Baranova, Tatyana G Vishnyakova, Roger Kurlander, Amy P Patterson

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Zhigang ChenFrom the Department of Laboratory Medicine, Clinical Center.
Thomas L EggermanFrom the Department of Laboratory Medicine, Clinical Center.
Alexander V BocharovFrom the Department of Laboratory Medicine, Clinical Center.
Irina N BaranovaFrom the Department of Laboratory Medicine, Clinical Center.
Tatyana G VishnyakovaFrom the Department of Laboratory Medicine, Clinical Center.
Roger KurlanderFrom the Department of Laboratory Medicine, Clinical Center.
Amy P PattersonFrom the Department of Laboratory Medicine, Clinical Center, amy.patterson@nih.gov.
National Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Apolipoprotein B mRNA-editing enzyme catalytic subunit 3 (APOBEC-3) enzymes are cytidine deaminases that are broadly and constitutively expressed. They are often up-regulated during carcinogenesis and candidate genes for causing the major single-base substitution in cancer-associated DNA mutations. Moreover, APOBEC-3s are involved in host innate immunity against many viruses. However, how APOBEC-3 mutational activity is regulated in normal and pathological conditions remains largely unknown. Heat shock protein levels are often elevated in both carcinogenesis and viral infection and are associated with DNA mutations. Here, using mutational analyses of hepatitis B virus (HBV), we found that Hsp90 stimulates deamination activity of APOBEC-3G (A3G), A3B, and A3C during co-expression in human liver HepG2 cells. Hsp90 directly stimulated A3G deamination activity when the purified proteins were used in

Indexed as

APOBEC-3G DeaminaseCarcinogenesisCytidineCytidine DeaminaseDeaminationDNA Mutational AnalysisDNA, RecombinantDNA, ViralHepatitis B virusHepatocytesHep G2 CellsHSP90 Heat-Shock ProteinsHumansImmunity, InnateMinor Histocompatibility AntigensMutagenesisAPOBEC3B protein, humanAPOBEC3C protein, humanAPOBEC-3G DeaminaseAPOBEC3G protein, humanCytidineCytidine DeaminaseDNA, RecombinantDNA, ViralHSP90 Heat-Shock ProteinsMinor Histocompatibility AntigensPeptide FragmentsRecombinant Fusion ProteinsRecombinant ProteinsAPOBEC-3Gcancercofactorcytidine deaminaseheat shock protein 90 (Hsp90)hepatitis B virus (HBV, Hep B)mutagenesis

Identifiers

PMID28637869
PMCPMC5555204
OpenAlexW2709085031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.