Evidence map›Paper›PMID 28635289›Full record

ArticleThe journal of physical chemistry. B2017

Exploring the Drug Resistance of HCV Protease.

Garima Jindal, Dibyendu Mondal, Arieh Warshel

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Exploring evolutionary trajectories of drug resistance.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Exploring the Effectiveness of Binding Free Energy Calculations.The journal of physical chemistry. B · 2019
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Garima JindalDepartment of Chemistry, University of Southern California , 3620 McClintock Avenue, Los Angeles, California 90089, United States.ORCID 0000-0001-9957-6293
Dibyendu MondalDepartment of Chemistry, University of Southern California , 3620 McClintock Avenue, Los Angeles, California 90089, United States.
Arieh WarshelDepartment of Chemistry, University of Southern California , 3620 McClintock Avenue, Los Angeles, California 90089, United States.
University of Southern California · US

Funding

THEORETICAL STUDIES OF ENZYMATIC REACTIONSR01GM024492 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI WARSHEL, ARIEH · 1985 to 2017
$5.0M
NIGMS NIH HHS R01 GM024492
6 · The paper itself

Abstract

Hepatitis C virus (HCV) currently affects several million people across the globe. One of the major classes of drugs against HCV inhibits the NS3/4A protease of the polyprotein chain. Efficacy of these drugs is severely limited due to the high mutation rate that results in several genetically related quasispecies. The molecular mechanism of drug resistance is frequently deduced from structural studies and binding free energies. However, prediction of new mutations requires the evaluation of both binding free energy of the drug as well as the parameters (k

Indexed as

Amino Acid SequenceAntiviral AgentsDEAD-box RNA HelicasesHepacivirusMonte Carlo MethodMutationNucleoside-TriphosphataseProtein BindingProtein Structure, TertiarySerine EndopeptidasesSubstrate SpecificityThermodynamicsViral Nonstructural ProteinsViral ProteasesAntiviral AgentsDEAD-box RNA HelicasesNS3 protein, hepatitis C virusNS4 protein, hepatitis C virusNucleoside-TriphosphataseSerine EndopeptidasesViral Nonstructural ProteinsViral Proteases

Identifiers

PMID28635289
PMCPMC6237193
OpenAlexW2640270266

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.