Evidence map›Paper›PMID 28635128›Full record

ArticleJournal of biophotonics2017

Development of a classification model for non-alcoholic steatohepatitis (NASH) using confocal Raman micro-spectroscopy.

Jie Yan, Yang Yu, Jeon Woong Kang, Zhi Yang Tam, Shuoyu Xu, Eliza Li Shan Fong, Surya Pratap Singh, Ziwei Song, Lisa Tucker-Kellogg, Peter T C So and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of biophotonics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Jie YanInstitute of Bioengineering and Nanotechnology, Agency for Science, Technology and Research (A*STAR), Singapore, 138669.
Yang YuInstitute of Bioengineering and Nanotechnology, Agency for Science, Technology and Research (A*STAR), Singapore, 138669.ORCID http://orcid.org/0000-0002-0339-3685
Jeon Woong KangLaser Biomedical Research Center, George R. Harrison Spectroscopy Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Zhi Yang TamBioSyM, Singapore-MIT Alliance for Research and Technology, Singapore, 138602.
Shuoyu XuInvitroCue Pte Ltd, Singapore, 138667.
Eliza Li Shan FongDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, 2 Medical Drive, Singapore, 117597.
Surya Pratap SinghLaser Biomedical Research Center, George R. Harrison Spectroscopy Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Ziwei SongInstitute of Bioengineering and Nanotechnology, Agency for Science, Technology and Research (A*STAR), Singapore, 138669.
Lisa Tucker-KelloggBioSyM, Singapore-MIT Alliance for Research and Technology, Singapore, 138602.
Peter T C SoBioSyM, Singapore-MIT Alliance for Research and Technology, Singapore, 138602.
Hanry YuInstitute of Bioengineering and Nanotechnology, Agency for Science, Technology and Research (A*STAR), Singapore, 138669.
Agency for Science, Technology and Research · SGNational University of Singapore · SGSingapore-MIT Alliance for Research and Technology · SGHealth First · USMassachusetts Institute of Technology · USWipro (Singapore) · SG

Funding

Wide-Field Short-Wave Infrared (SWIR) multiphoton (MP) tissue imagingP41EB015871 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SO, PETER T. · 2012 to 2021
$11.3M
NIBIB NIH HHS P41 EB015871
6 · The paper itself

Abstract

Non-alcoholic fatty liver disease (NAFLD) is the most common liver disorder in developed countries [1]. A subset of individuals with NAFLD progress to non-alcoholic steatohepatitis (NASH), an advanced form of NAFLD which predisposes individuals to cirrhosis, liver failure and hepatocellular carcinoma. The current gold standard for NASH diagnosis and staging is based on histological evaluation, which is largely semi-quantitative and subjective. To address the need for an automated and objective approach to NASH detection, we combined Raman micro-spectroscopy and machine learning techniques to develop a classification model based on a well-established NASH mouse model, using spectrum pre-processing, biochemical component analysis (BCA) and logistic regression. By employing a selected pool of biochemical components, we identified biochemical changes specific to NASH and show that the classification model is capable of accurately detecting NASH (AUC=0.85-0.87) in mice. The unique biochemical fingerprint generated in this study may serve as a useful criterion to be leveraged for further validation in clinical samples.

Indexed as

MicroscopySpectrum Analysis, RamanAnimalsFemaleImage Processing, Computer-AssistedMiceMice, Inbred C57BLNon-alcoholic Fatty Liver DiseasePregnancybiochemical component analysismodel fittingnon-alcoholic fatty liver diseasenon-alcoholic steatohepatitisRaman micro-spectroscopic imaging

Identifiers

PMID28635128
PMCPMC5902180
OpenAlexW2653985489

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.