Evidence map›Paper›PMID 28634384›Full record

ArticleScientific reports2017

Alternative splicing regulates distinct subcellular localization of Epithelial splicing regulatory protein 1 (Esrp1) isoforms.

Yueqin Yang, Russ P Carstens

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Functional analysis ofbioRxiv : the preprint server for biology · 2024
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. The alternative proteome in neurobiology.Frontiers in cellular neuroscience · 2022
    Review
  9. Article
  10. Prognostic role of TSPAN1, KIAA1324 and ESRP1 in prostate cancer.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2021
    Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yueqin YangDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, 19104, USA.
Russ P CarstensDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, 19104, USA. russcars@upenn.edu.

Funding

Study Design and Data AnalysisP30AR069589 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice · 2016 to 2026
$8.6M
Esrp regulated programs of alternative splicing in skin development and functionR01AR066741 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2015 to 2019
$1.9M
Functions of Epithelial Splicing Regulatory Proteins and their role in the EMTR01GM088809 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2009 to 2013
$1.5M
Esrp regulated programs of alternative splicing in skin development and functionR56AR066741 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2014 to 2014
$370k
NIAMS NIH HHS P30 AR069589NIAMS NIH HHS R01 AR066741NIAMS NIH HHS R56 AR066741NIGMS NIH HHS R01 GM088809
6 · The paper itself

Abstract

Epithelial-Splicing-Regulatory-Protein 1 (Esrp1) is a cell-type specific RNA-binding protein (RBP) that is essential for mammalian development through maintenance of epithelial cell properties including barrier function. Esrp1 also regulates splicing during the epithelial to mesenchymal transition (EMT). It contains three highly conserved RNA recognition motifs (RRMs) in the absence of other clearly defined protein domains. Esrp1 itself is also alternatively spliced to produce multiple protein isoforms. Here we determined that two competing alternative 5' splice sites in exon 12 yield Esrp1 isoforms with differential nucleocytoplasmic localization. We carried out a detailed characterization of the Esrp1 peptide that is sufficient to confer nuclear localization. Furthermore, we identified splice variants encoding distinct nuclear and cytoplasmic isoforms of fusilli, the D. Melanogaster Esrp1 ortholog. Our observations demonstrate that the production of both nuclear and cytoplasmic Esrp1 isoforms through alternative splicing is phylogenetically conserved; strongly suggesting it is biologically significant. Thus, while previous studies have described extensive regulation by nuclear Esrp1 to promote epithelial specific splicing, it will be of great interest to study the contribution of cytoplasmic Esrp1 in maintenance of epithelial cell functions.

Indexed as

Alternative SplicingAmino Acid MotifsAmino Acid SequenceAnimalsCell NucleusExonsHeLa CellsHumansIntracellular SpaceMiceProtein Sorting SignalsRNA-Binding ProteinsRNA IsoformsRNA Splice SitesRNA TransportESRP1 protein, mouseProtein Sorting SignalsRNA-Binding ProteinsRNA IsoformsRNA Splice Sites

Identifiers

PMID28634384
PMCPMC5478600

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.