Evidence map›Paper›PMID 28634302›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Structure of human Fe-S assembly subcomplex reveals unexpected cysteine desulfurase architecture and acyl-ACP-ISD11 interactions.

Seth A Cory, Jonathan G Van Vranken, Edward J Brignole, Shachin Patra, Dennis R Winge, Catherine L Drennan, Jared Rutter, David P Barondeau

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 191 citations in OpenAlex.

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  19. Mitochondria function in cytoplasmic FeS protein biogenesis.Biochimica et biophysica acta. Molecular cell research · 2024
    Review
  20. Article

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Seth A CoryDepartment of Chemistry, Texas A&M University, College Station, TX 77842.
Jonathan G Van VrankenDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112.
Edward J BrignoleDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139.
Shachin PatraDepartment of Chemistry, Texas A&M University, College Station, TX 77842.
Dennis R WingeDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112.
Catherine L DrennanDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139.
Jared RutterDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112.
David P BarondeauDepartment of Chemistry, Texas A&M University, College Station, TX 77842; barondeau@tamu.edu.
Texas A&M University · USHoward Hughes Medical Institute · USUniversity of Utah · USMassachusetts Institute of Technology · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Proteomics CoreU54DK110858 · NIDDK · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Anna E Beaudin, JAMES Eric COX · 2016 to 2026
$8.6M
Structure and Mechanism of the Human FE-S Cluster Assembly ComplexR01GM096100 · NIGMS · TEXAS A&M UNIVERSITY · PI BARONDEAU, DAVID P · 2011 to 2024
$3.5M
Succinate Dehydrogenase: Biogenesis and Role in DiseaseR01GM110755 · NIGMS · UNIVERSITY OF UTAH · PI WINGE, DENNIS R. · 2014 to 2021
$2.3M
Howard Hughes Medical InstituteNIDDK NIH HHS U54 DK110858NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM096100NIGMS NIH HHS R01 GM110755
6 · The paper itself

Abstract

In eukaryotes, sulfur is mobilized for incorporation into multiple biosynthetic pathways by a cysteine desulfurase complex that consists of a catalytic subunit (NFS1), LYR protein (ISD11), and acyl carrier protein (ACP). This NFS1-ISD11-ACP (SDA) complex forms the core of the iron-sulfur (Fe-S) assembly complex and associates with assembly proteins ISCU2, frataxin (FXN), and ferredoxin to synthesize Fe-S clusters. Here we present crystallographic and electron microscopic structures of the SDA complex coupled to enzyme kinetic and cell-based studies to provide structure-function properties of a mitochondrial cysteine desulfurase. Unlike prokaryotic cysteine desulfurases, the SDA structure adopts an unexpected architecture in which a pair of ISD11 subunits form the dimeric core of the SDA complex, which clarifies the critical role of ISD11 in eukaryotic assemblies. The different quaternary structure results in an incompletely formed substrate channel and solvent-exposed pyridoxal 5'-phosphate cofactor and provides a rationale for the allosteric activator function of FXN in eukaryotic systems. The structure also reveals the 4'-phosphopantetheine-conjugated acyl-group of ACP occupies the hydrophobic core of ISD11, explaining the basis of ACP stabilization. The unexpected architecture for the SDA complex provides a framework for understanding interactions with acceptor proteins for sulfur-containing biosynthetic pathways, elucidating mechanistic details of eukaryotic Fe-S cluster biosynthesis, and clarifying how defects in Fe-S cluster assembly lead to diseases such as Friedreich's ataxia. Moreover, our results support a lock-and-key model in which LYR proteins associate with acyl-ACP as a mechanism for fatty acid biosynthesis to coordinate the expression, Fe-S cofactor maturation, and activity of the respiratory complexes.

Indexed as

Acyl Carrier ProteinBinding SitesCarbon-Sulfur LyasesCatalytic DomainFrataxinGas Chromatography-Mass SpectrometryHumansIron-Binding ProteinsIron-Regulatory ProteinsIron-Sulfur ProteinsKineticsLipidsMitochondriaProtein DomainsProtein Structure, SecondarySaccharomyces cerevisiaeAcyl Carrier ProteinCarbon-Sulfur Lyasescysteine desulfuraseFrataxinIron-Binding ProteinsIron-Regulatory ProteinsIron-Sulfur ProteinsLipidsLYRM4 protein, humanNFS1 protein, humanACPfrataxiniron–sulfur clusterLYRPLP

Identifiers

PMID28634302
PMCPMC5502623
OpenAlexW2692809343

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.