Evidence map›Paper›PMID 28633328›Full record

ArticleJournal of experimental botany2017

Identification and characterization of a solute carrier, CIA8, involved in inorganic carbon acclimation in Chlamydomonas reinhardtii.

Marylou C Machingura, Joanna Bajsa-Hirschel, Susan M Laborde, Joshua B Schwartzenburg, Bratati Mukherjee, Ananya Mukherjee, Steve V Pollock, Britta Förster, G Dean Price, James V Moroney

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Adapting from Low to High: An Update to COPlants (Basel, Switzerland) · 2023
    Review
  2. Article
  3. Review
  4. Prospects for Engineering Biophysical COAnnual review of plant biology · 2020
    Review
  5. Review
  6. Elucidation and genetic intervention of COJournal of biosciences · 2020
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Marylou C MachinguraDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Joanna Bajsa-HirschelDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Susan M LabordeDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Joshua B SchwartzenburgDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Bratati MukherjeeARC Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, Australian National University, Canberra ACT 2601, Australia.
Ananya MukherjeeDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Steve V PollockDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Britta FörsterARC Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, Australian National University, Canberra ACT 2601, Australia.
G Dean PriceARC Centre of Excellence for Translational Photosynthesis, Division of Plant Sciences, Research School of Biology, Australian National University, Canberra ACT 2601, Australia.
James V MoroneyDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Louisiana State University · USARC Centre of Excellence for Transformative Meta-Optical Systems · AUAustralian National University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The supply of inorganic carbon (Ci) at the site of fixation by Rubisco is a key parameter for efficient CO2 fixation in aquatic organisms including the green alga, Chlamydomonas reinhardtii. Chlamydomonas reinhardtii cells, when grown on limiting CO2, have a CO2-concentrating mechanism (CCM) that functions to concentrate CO2 at the site of Rubisco. Proteins thought to be involved in inorganic carbon uptake have been identified and localized to the plasma membrane or chloroplast envelope. However, current CCM models suggest that additional molecular components are involved in Ci uptake. In this study, the gene Cia8 was identified in an insertional mutagenesis screen and characterized. The protein encoded by Cia8 belongs to the sodium bile acid symporter subfamily. Transcript levels for this gene were significantly up-regulated when the cells were grown on low CO2. The cia8 mutant exhibited reduced growth and reduced affinity for Ci when grown in limiting CO2 conditions. Prediction programs localize this protein to the chloroplast. Ci uptake and the photosynthetic rate, particularly at high external pH, were reduced in the mutant. The results are consistent with the model that CIA8 is involved in Ci uptake in C. reinhardtii.

Indexed as

PhotosynthesisAlgal ProteinsCarbonCarbon Compounds, InorganicChlamydomonas reinhardtiiChloroplast ProteinsUp-RegulationAlgal ProteinsCarbonCarbon Compounds, InorganicChloroplast ProteinsBile acid transporterCCMChlamydomonas reinhardtiiCO2 assimilationinorganic carbon uptake

Identifiers

PMID28633328
PMCPMC5853530
OpenAlexW2626292151

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.