Evidence map›Paper›PMID 28631606›Full record

ArticleThe Journal of general virology2017

Highly pathogenic avian influenza H5N1 clade 2.3.2.1 and clade 2.3.4 viruses do not induce a clade-specific phenotype in mallard ducks.

Mariette Ducatez, Stephanie Sonnberg, Jeri Carol Crumpton, Adam Rubrum, Phouvong Phommachanh, Bounlom Douangngeun, Malik Peiris, Yi Guan, Robert Webster, Richard Webby

Open access · greenAbstract read
In one paragraph

Article in The Journal of general virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Counting cases, conserving species: addressing highly pathogenic avian influenza in wildlife.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Avian influenza overview September - November 2017.EFSA journal. European Food Safety Authority · 2017
    Article
  12. Avian influenza overview October 2016-August 2017.EFSA journal. European Food Safety Authority · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Mariette DucatezDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Stephanie SonnbergDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Jeri Carol CrumptonDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Adam RubrumDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Phouvong PhommachanhDepartment of Livestock and Fisheries, Ministry of Agriculture, Vientiane, Lao PDR, Laos.
Bounlom DouangngeunDepartment of Livestock and Fisheries, Ministry of Agriculture, Vientiane, Lao PDR, Laos.
Malik PeirisDepartment of Microbiology, State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong SAR.
Yi GuanDepartment of Microbiology, State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong SAR.
Robert WebsterDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Richard WebbyDivision of Virology, Department of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
St. Jude Children's Research Hospital · USMinistry of Agriculture and Forestry · LAUniversity of Hong Kong · HKUniversité de Toulouse · FR

Funding

NIAID NIH HHS HHSN266200700005C
6 · The paper itself

Abstract

Among the diverse clades of highly pathogenic avian influenza (HPAI) H5N1 viruses of the goose/Guangdong lineage, only a few have been able to spread across continents: clade 2.2 viruses spread from China to Europe and into Africa in 2005-2006, clade 2.3.2.1 viruses spread from China to Eastern Europe in 2009-2010 and clade 2.3.4.4 viruses of the H5Nx subtype spread from China to Europe and North America in 2014/2015. While the poultry trade and wild-bird migration have been implicated in the spread of HPAI H5N1 viruses, it has been proposed that robust virus-shedding by wild ducks in the absence of overt clinical signs may have contributed to the wider dissemination of the clade 2.2, 2.3.2.1 and 2.3.4.4 viruses. Here we determined the phenotype of two divergent viruses from clade 2.3.2.1, a clade that spread widely, and two divergent viruses from clade 2.3.4, a clade that was constrained to Southeast Asia, in young (ducklings) and adult (juvenile) mallard ducks. We found that the virus-shedding magnitude and duration, transmission pattern and pathogenicity of the viruses in young and adult mallard ducks were largely independent of the virus clade. A clade-specific pattern could only be detected in terms of cumulative virus shedding, which was higher with clade 2.3.2.1 than with clade 2.3.4 viruses in juvenile mallards, but not in ducklings. The ability of clade 2.3.2.1c A/common buzzard/Bulgaria/38 WB/2010-like viruses to spread cross-continentally may, therefore, have been strain-specific or independent of phenotype in wild ducks.

Indexed as

GenotypeVirus SheddingAfricaAnimalsAsiaDucksEuropeInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsNorth AmericaPhenotype

Identifiers

PMID28631606
PMCPMC5825919
OpenAlexW2720670899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.