Evidence map›Paper›PMID 28630932›Full record

ArticleScience advances2017

Differential intron retention in

Ira W Deveson, Clare E Holleley, James Blackburn, Jennifer A Marshall Graves, John S Mattick, Paul D Waters, Arthur Georges

Abstract read
In one paragraph

Article in Science advances, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
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  7. Article
  8. Overexpression ofZoological research · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. TruncatedScience advances · 2022
    Article
  14. Article
  15. Article
  16. Sex-specific splicing of Z- and W-borneProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Article
  18. The life and death of RNA across temperatures.Computational and structural biotechnology journal · 2022
    Review
  19. Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ira W DevesonGenomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, New South Wales, Australia.
Clare E HolleleyInstitute for Applied Ecology, University of Canberra, Canberra, Australian Capital Territory, Australia.ORCID 0000-0002-5257-0019
James BlackburnGenomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, New South Wales, Australia.
Jennifer A Marshall GravesInstitute for Applied Ecology, University of Canberra, Canberra, Australian Capital Territory, Australia.
John S MattickSchool of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales (UNSW), Sydney, New South Wales, Australia.
Paul D WatersSchool of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales (UNSW), Sydney, New South Wales, Australia.
Arthur GeorgesInstitute for Applied Ecology, University of Canberra, Canberra, Australian Capital Territory, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In many vertebrates, sex of offspring is determined by external environmental cues rather than by sex chromosomes. In reptiles, for instance, temperature-dependent sex determination (TSD) is common. Despite decades of work, the mechanism by which temperature is converted into a sex-determining signal remains mysterious. This is partly because it is difficult to distinguish the primary molecular events of TSD from the confounding downstream signatures of sexual differentiation. We use the Australian central bearded dragon, in which chromosomal sex determination is overridden at high temperatures to produce sex-reversed female offspring, as a unique model to identify TSD-specific features of the transcriptome. We show that an intron is retained in mature transcripts from each of two

Indexed as

Genes, ModifierIntronsTemperatureAnimalsBiomarkersChromatinComputational BiologyFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalMaleModels, GeneticReptilesSex Determination ProcessesTranscriptomeBiomarkersChromatinJARID2JMJD3POMC-mediated stressPRC2 complexretained intronsex reversal

Identifiers

PMID28630932
PMCPMC5470834

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.