Evidence map›Paper›PMID 28630463›Full record

ArticleScientific reports2017

The role of Antibody Vκ Framework 3 region towards Antigen binding: Effects on recombinant production and Protein L binding.

Chinh Tran-To Su, Wei-Li Ling, Wai-Heng Lua, Jun-Jie Poh, Samuel Ken-En Gan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Chinh Tran-To SuBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Wei-Li LingBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Wai-Heng LuaBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Jun-Jie PohBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Samuel Ken-En GanBioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore. samuelg@bii.a-star.edu.sg.
Agency for Science, Technology and Research · SGBioinformatics Institute · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibody research has traditionally focused on heavy chains, often neglecting the important complementary role of light chains in antibody formation and secretion. In the light chain, the complementarity-determining region 3 (VL-CDR3) is specifically implicated in disease states. By modulating VL-CDR3 exposure on the scaffold through deletions in the framework region 3 (VL-FWR3), we further investigated the effects on secretion in recombinant production and antigen binding kinetics. Our random deletions of two residues in the VL-FWR3 of a Trastuzumab model showed that the single deletions could impact recombinant production without significant effect on Her2 binding. When both the selected residues were deleted, antibody secretion was additively decreased, and so was Her2 binding kinetics. Interestingly, we also found allosteric effects on the Protein L binding site at VL-FWR1 elicited by these deletions in VL- FWR3. Together, these findings demonstrate the importance of light chain FWR3 in antigen binding, recombinant production, and antibody purification using Protein L.

Indexed as

Binding Sites, AntibodyAntigensComplementarity Determining RegionsErb-b2 Receptor Tyrosine KinasesHumansKineticsRecombinant ProteinsTrastuzumabAntigensComplementarity Determining RegionsERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesRecombinant ProteinsTrastuzumab

Identifiers

PMID28630463
PMCPMC5476676
OpenAlexW2624838086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.