Evidence map›Paper›PMID 28628092›Full record

ArticleNature immunology2017

Tissue-resident memory features are linked to the magnitude of cytotoxic T cell responses in human lung cancer.

Anusha-Preethi Ganesan, James Clarke, Oliver Wood, Eva M Garrido-Martin, Serena J Chee, Toby Mellows, Daniela Samaniego-Castruita, Divya Singh, Grégory Seumois, Aiman Alzetani and 7 more

Abstract read
In one paragraph

Article in Nature immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 358 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
358citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

358 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
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  20. Cancer Stem Cells Shift Metabolite Acetyl-Coenzyme A to Abrogate the Differentiation of CD103Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article

298 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Anusha-Preethi GanesanLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
James ClarkeLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
Oliver WoodCancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK.
Eva M Garrido-MartinClinical and Experimental Sciences, Sir Henry Wellcome Laboratories, Faculty of Medicine University of Southampton, Southampton, UK.ORCID http://orcid.org/0000-0002-8094-2668
Serena J CheeCancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK.
Toby MellowsClinical and Experimental Sciences, Sir Henry Wellcome Laboratories, Faculty of Medicine University of Southampton, Southampton, UK.
Daniela Samaniego-CastruitaLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
Divya SinghLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
Grégory SeumoisLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.ORCID http://orcid.org/0000-0002-8164-6852
Aiman AlzetaniSouthampton University Hospitals NHS foundation Trust, Southampton, UK.
Edwin WooSouthampton University Hospitals NHS foundation Trust, Southampton, UK.
Peter S FriedmannClinical and Experimental Sciences, Sir Henry Wellcome Laboratories, Faculty of Medicine University of Southampton, Southampton, UK.
Emma V KingCancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK.
Gareth J ThomasCancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK.
Tilman Sanchez-ElsnerClinical and Experimental Sciences, Sir Henry Wellcome Laboratories, Faculty of Medicine University of Southampton, Southampton, UK.
Pandurangan VijayanandLa Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
Christian H OttensmeierCancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK.

Funding

Illumina HiSeq 2500 Sequencing SystemS10OD016262 · OD · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI RAO, ANJANA · 2013 to 2013
$600k
Cancer Research UK 15951Cancer Research UK 18158Cancer Research UK 18161Cancer Research UK 18892Cancer Research UK 20613Cancer Research UK 21998Cancer Research UK 22795Medical Research Council MR/P024351/1NIH HHS S10 OD016262
6 · The paper itself

Abstract

Therapies that boost the anti-tumor responses of cytotoxic T lymphocytes (CTLs) have shown promise; however, clinical responses to the immunotherapeutic agents currently available vary considerably, and the molecular basis of this is unclear. We performed transcriptomic profiling of tumor-infiltrating CTLs from treatment-naive patients with lung cancer to define the molecular features associated with the robustness of anti-tumor immune responses. We observed considerable heterogeneity in the expression of molecules associated with activation of the T cell antigen receptor (TCR) and of immunological-checkpoint molecules such as 4-1BB, PD-1 and TIM-3. Tumors with a high density of CTLs showed enrichment for transcripts linked to tissue-resident memory cells (T

Indexed as

AdenocarcinomaAdultAgedAged, 80 and overAntigens, CDCarcinoma, Squamous CellFemaleGene Expression ProfilingHead and Neck NeoplasmsHepatitis A Virus Cellular Receptor 2HumansImmunologic MemoryImmunotherapyIntegrin alpha ChainsLung NeoplasmsLymphocytes, Tumor-Infiltratingalpha E integrinsAntigens, CDHAVCR2 protein, humanHepatitis A Virus Cellular Receptor 2Integrin alpha ChainsPDCD1 protein, humanProgrammed Cell Death 1 ReceptorReceptors, Antigen, T-CellTumor Necrosis Factor Receptor Superfamily, Member 9

Identifiers

PMID28628092
PMCPMC6036910

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.