Evidence map›Paper›PMID 28623366›Full record

ArticleScientific reports2017

A novel imaging method for correlating 2D light microscopic data and 3D volume data based on block-face imaging.

Yuki Tajika, Tohru Murakami, Keiya Iijima, Hiroki Gotoh, Maiko Takahashi-Ikezawa, Hitoshi Ueno, Yuhei Yoshimoto, Hiroshi Yorifuji

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Thin-Adipose Compartment at the Colonic Mesentery-Perirenal Fat Interface: Histological and Three-Dimensional Morphological Studies.International journal of urology : official journal of the Japanese Urological Association · 2026
    Article
  3. International journal of molecular sciences · 2026
    Article
  4. 3D Imaging of Gene Expression Domains in the Mouse Heart.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. On the Usage of Brain Atlases in Neuroimaging Research.Molecular imaging and biology · 2018
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuki TajikaDepartment of Anatomy, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan. ytajika@gunma-u.ac.jp.
Tohru MurakamiDepartment of Anatomy, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.
Keiya IijimaDepartment of Neurosurgery, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.
Hiroki GotohLaboratory of Sericulture and Entomoresources, Graduate School of Bioagricultural Sciences, Nagoya University. Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan.
Maiko Takahashi-IkezawaDepartment of Occupational Therapy, Graduate School of Health Science, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.
Hitoshi UenoDepartment of Anatomy, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.
Yuhei YoshimotoDepartment of Neurosurgery, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.
Hiroshi YorifujiDepartment of Anatomy, Graduate School of Medicine, Gunma University. 39-22 Showa-machi 3-chome, Maebashi, Gunma, 371-8511, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have developed an imaging method designated as correlative light microscopy and block-face imaging (CoMBI), which contributes to improve the reliability of morphological analyses. This method can collect both the frozen sections and serial block-face images in a single specimen. The frozen section can be used for conventional light microscopic analysis to obtain 2-dimensional (2D) anatomical and molecular information, while serial block-face images can be used as 3-dimensional (3D) volume data for anatomical analysis. Thus, the sections maintain positional information in the specimen, and allows the correlation of 2D microscopic data and 3D volume data in a single specimen. The subjects can vary in size and type, and can cover most specimens encountered in biology. In addition, the required system for our method is characterized by cost-effectiveness. Here, we demonstrated the utility of CoMBI using specimens ranging in size from several millimeters to several centimeters, i.e., mouse embryos, human brainstem samples, and stag beetle larvae, and present successful correlation between the 2D light microscopic images and 3D volume data in a single specimen.

Indexed as

MicroscopyAnimalsBrain StemData AnalysisEmbryo, MammalianFluorescent Antibody TechniqueHistocytochemistryHumansImage Processing, Computer-AssistedImaging, Three-DimensionalMiceMolecular Imaging

Identifiers

PMID28623366
PMCPMC5473845

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.