Evidence map›Paper›PMID 28620713›Full record

ArticleHuman genetics2017

Angiopoietin receptor TEK interacts with CYP1B1 in primary congenital glaucoma.

Meha Kabra, Wei Zhang, Sonika Rathi, Anil K Mandal, Sirisha Senthil, Goutham Pyatla, Muralidhar Ramappa, Seema Banerjee, Konegari Shekhar, Srinivas Marmamula and 5 more

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

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  19. A single-cell transcriptomic atlas of the human ciliary body.Cellular and molecular life sciences : CMLS · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Meha KabraKallam Anji Reddy Molecular Genetics Laboratory, Brien Holden Eye Research Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Wei ZhangDepartment of Ophthalmology, UMASS Medical School, Worcester, MA, USA.
Sonika RathiKallam Anji Reddy Molecular Genetics Laboratory, Brien Holden Eye Research Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Anil K MandalJasti V Ramanamma Children's Eye Care Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Sirisha SenthilJasti V Ramanamma Children's Eye Care Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Goutham PyatlaKallam Anji Reddy Molecular Genetics Laboratory, Brien Holden Eye Research Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Muralidhar RamappaTej Kohli Cornea Institute, L.V. Prasad Eye Institute, Hyderabad, India.
Seema BanerjeeGullapalli Pratibha Rao International Centre for Advancement of Rural Eye Care, L.V. Prasad Eye Institute, Hyderabad, India.
Konegari ShekharGullapalli Pratibha Rao International Centre for Advancement of Rural Eye Care, L.V. Prasad Eye Institute, Hyderabad, India.
Srinivas MarmamulaGullapalli Pratibha Rao International Centre for Advancement of Rural Eye Care, L.V. Prasad Eye Institute, Hyderabad, India.
Asha L MettlaGullapalli Pratibha Rao International Centre for Advancement of Rural Eye Care, L.V. Prasad Eye Institute, Hyderabad, India.
Inderjeet KaurKallam Anji Reddy Molecular Genetics Laboratory, Brien Holden Eye Research Centre, L.V. Prasad Eye Institute, Hyderabad, India.
Rohit C KhannaGullapalli Pratibha Rao International Centre for Advancement of Rural Eye Care, L.V. Prasad Eye Institute, Hyderabad, India.
Hemant KhannaDepartment of Ophthalmology, UMASS Medical School, Worcester, MA, USA.
Subhabrata ChakrabartiKallam Anji Reddy Molecular Genetics Laboratory, Brien Holden Eye Research Centre, L.V. Prasad Eye Institute, Hyderabad, India. subho@lvpei.org.ORCID 0000-0003-3717-4963
L V Prasad Eye Institute · INUniversity of Massachusetts Chan Medical School · US

Funding

Function of Ciliary Disease Protein Retinitis Pigmentosa GTPase Regulator (RPGR)R01EY022372 · NEI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PAZOUR, GREGORY J · 2012 to 2020
$3.7M
NEI NIH HHS R01 EY022372
6 · The paper itself

Abstract

Primary congenital glaucoma (PCG) is a severe autosomal recessive ocular disorder associated with considerable clinical and genetic heterogeneity. Recently, rare heterozygous alleles in the angiopoietin receptor-encoding gene TEK were implicated in PCG. We undertook this study to ascertain the second mutant allele in a large cohort (n = 337) of autosomal recessive PCG cases that carried heterozygous TEK mutations. Our investigations revealed 12 rare heterozygous missense mutations in TEK by targeted sequencing. Interestingly, four of these TEK mutations (p.E103D, p.I148T, p.Q214P, and p.G743A) co-occurred with three heterozygous mutations in another major PCG gene CYP1B1 (p.A115P, p.E229K, and p.R368H) in five families. The parents of these probands harbored either of the heterozygous TEK or CYP1B1 alleles and were asymptomatic, indicating a potential digenic mode of inheritance. Furthermore, we ascertained the interactions of TEK and CYP1B1 by co-transfection and pull-down assays in HEK293 cells. Ligand responsiveness of the wild-type and mutant TEK proteins was assessed in HUVECs using immunofluorescence analysis. We observed that recombinant TEK and CYP1B1 proteins interact with each other, while the disease-associated allelic combinations of TEK (p.E103D)::CYP1B1 (p.A115P), TEK (p.Q214P)::CYP1B1 (p.E229K), and TEK (p.I148T)::CYP1B1 (p.R368H) exhibit perturbed interaction. The mutations also diminished the ability of TEK to respond to ligand stimulation, indicating perturbed TEK signaling. Overall, our data suggest that interaction of TEK and CYP1B1 contributes to PCG pathogenesis and argue that TEK-CYP1B1 may perform overlapping as well as distinct functions in manifesting the disease etiology.

Indexed as

AllelesCohort StudiesCytochrome P-450 CYP1B1FemaleGene FrequencyGenome, HumanGenomicsGlaucomaHaplotypesHEK293 CellsHeterozygoteHumansHuman Umbilical Vein Endothelial CellsLinkage DisequilibriumMaleMutation, MissenseCYP1B1 protein, humanCytochrome P-450 CYP1B1Receptor, TIE-2

Identifiers

PMID28620713
PMCPMC5953556
OpenAlexW2625257252

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.