Evidence map›Paper›PMID 28620586›Full record

ReviewFrontiers in cellular and infection microbiology2017

Tracking Proteins Secreted by Bacteria: What's in the Toolbox?

Benoit Maffei, Olivera Francetic, Agathe Subtil

Abstract readReview
In one paragraph

Review in Frontiers in cellular and infection microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Experimental Approaches to Visualize Effector Protein Translocation During Host-Pathogen Interactions.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Identification of virulence-associated factors in Vibrio parahaemolyticus with special reference to moonlighting protein: a secretomics study.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Exploring the secretome ofFrontiers in bioengineering and biotechnology · 2024
    Article
  16. The impact ofJournal of genomics · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Benoit MaffeiUnité de Biologie Cellulaire de l'Infection Microbienne, Institut PasteurParis, France.
Olivera FranceticUnité de Biochimie des Interactions Macromoléculaires, Institut PasteurParis, France.
Agathe SubtilUnité de Biologie Cellulaire de l'Infection Microbienne, Institut PasteurParis, France.

Funding

European Research Council 282046
6 · The paper itself

Abstract

Bacteria have acquired multiple systems to expose proteins on their surface, release them in the extracellular environment or even inject them into a neighboring cell. Protein secretion has a high adaptive value and secreted proteins are implicated in many functions, which are often essential for bacterial fitness. Several secreted proteins or secretion machineries have been extensively studied as potential drug targets. It is therefore important to identify the secretion substrates, to understand how they are specifically recognized by the secretion machineries, and how transport through these machineries occurs. The purpose of this review is to provide an overview of the biochemical, genetic and imaging tools that have been developed to evaluate protein secretion in a qualitative or quantitative manner. After a brief overview of the different tools available, we will illustrate their advantages and limitations through a discussion of some of the current open questions related to protein secretion. We will start with the question of the identification of secreted proteins, which for many bacteria remains a critical initial step toward a better understanding of their interactions with the environment. We will then illustrate our toolbox by reporting how these tools have been applied to better understand how substrates are recognized by their cognate machinery, and how secretion proceeds. Finally, we will highlight recent approaches that aim at investigating secretion in real time, and in complex environments such as a tissue or an organism.

Indexed as

BacteriaBacterial Outer Membrane ProteinsBacterial Physiological PhenomenaBacterial ProteinsBacterial Secretion SystemsBacteriophagesProtein Sorting SignalsProtein TransportProteomicsYeastsBacterial Outer Membrane ProteinsBacterial ProteinsBacterial Secretion SystemsProtein Sorting Signalsexoproteomelive imagingreportersecretion machinerysecretion signal

Identifiers

PMID28620586
PMCPMC5449463

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.